RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 MRPL23Q16540 153 aaKnown RBP8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 NEGR1Q7Z3B1 354 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 THAP6Q8TBB0 222 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 FXYD5Q96DB9 178 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 PHYHIPLQ96FC7 376 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 ARPC5LQ9BPX5 153 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 AAMDCQ9H7C9 122 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 GPN1Q9HCN4 374 aaPredicted RBP8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 NUDT15Q9NV35 164 aa8.14□□□□□ -1.11
SHROOM1-206ENST00000495680 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 NBEAP1P0C6P0 100 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 PVALBP20472 110 aaPredicted RBP8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 ZNF138P52744 262 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 NHLH2Q02577 135 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 ZNF415Q09FC8 603 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 STX12Q86Y82 276 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 MRPL32Q9BYC8 188 aaKnown RBP8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 PTTG2Q9NZH5 202 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 MSRB1Q9NZV6 116 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 LY96Q9Y6Y9 160 aa8.13□□□□□ -1.11
SHROOM1-206ENST00000495680 TRGV4A0A0C4DH28 118 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 LOC100131303A0A0U1RQF7 123 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 GYPEP15421 78 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 SRIP30626 198 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 HBG1P69891 147 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 HBG2P69892 147 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 CNPY1Q3B7I2 92 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 NFE4Q86UQ8 179 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 FRZBQ92765 325 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 OR51M1Q9H341 326 aa8.12□□□□□ -1.11
SHROOM1-206ENST00000495680 EIF3GO75821 320 aaKnown RBP eCLIP8.11□□□□□ -1.11
SHROOM1-206ENST00000495680 IFNA5P01569 189 aa8.11□□□□□ -1.11
SHROOM1-206ENST00000495680 SLAQ13239 276 aa8.11□□□□□ -1.11
SHROOM1-206ENST00000495680 ZNF266Q14584 549 aa8.11□□□□□ -1.11
SHROOM1-206ENST00000495680 ATP6V1FQ16864 119 aa8.11□□□□□ -1.11
SHROOM1-206ENST00000495680 OR5C1Q8NGR4 320 aa8.11□□□□□ -1.11
SHROOM1-206ENST00000495680 PAXXQ9BUH6 204 aa8.11□□□□□ -1.11
SHROOM1-206ENST00000495680 TRAV9-2A0A087WT02 112 aa8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 H2AFB2P0C5Z0 115 aa8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 GCSHP23434 173 aa8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 RANP62826 216 aaKnown RBP8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 TMEM183BQ1AE95 376 aa8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 IQCF2Q8IXL9 164 aa8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 OR10G4Q8NGN3 311 aa8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 RASL10AQ92737 203 aa8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
SHROOM1-206ENST00000495680 TRBV7-9A0A0J9YWB2 115 aa8.09□□□□□ -1.11
SHROOM1-206ENST00000495680 LRCOL1A6NCL2 159 aa8.09□□□□□ -1.11
SHROOM1-206ENST00000495680 SIX6O95475 246 aa8.09□□□□□ -1.11
SHROOM1-206ENST00000495680 CRYGDP07320 174 aa8.09□□□□□ -1.11
SHROOM1-206ENST00000495680 EVI2AP22794 236 aa8.09□□□□□ -1.11
SHROOM1-206ENST00000495680 OR5AC2Q9NZP5 309 aa8.09□□□□□ -1.11
SHROOM1-206ENST00000495680 IGHV3-16A0A0C4DH30 117 aa8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 H0YIZ8 118 aa8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 GNRH2O43555 120 aa8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 OR7C2O60412 319 aa8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 Q6AWC8 147 aa8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 PCNPQ8WW12 178 aaKnown RBP8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 WDR61Q9GZS3 305 aaKnown RBP8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 SLC25A31Q9H0C2 315 aa8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 NAGKQ9UJ70 344 aa8.08□□□□□ -1.12
SHROOM1-206ENST00000495680 IGLV5-52A0A0A0MRZ9 124 aa8.07□□□□□ -1.12
SHROOM1-206ENST00000495680 TRAV4A0A0B4J268 109 aa8.07□□□□□ -1.12
SHROOM1-206ENST00000495680 RBAKDNA6NC62 111 aa8.07□□□□□ -1.12
SHROOM1-206ENST00000495680 DIRC3C9JPN6 131 aa8.07□□□□□ -1.12
SHROOM1-206ENST00000495680 ORM1P02763 201 aa8.07□□□□□ -1.12
SHROOM1-206ENST00000495680 UBE2L3P68036 154 aaKnown RBP8.07□□□□□ -1.12
SHROOM1-206ENST00000495680 LRRC37A5PQ49AS3 106 aa8.07□□□□□ -1.12
SHROOM1-206ENST00000495680 FAM30AQ9NZY2 134 aa8.07□□□□□ -1.12
SHROOM1-206ENST00000495680 C9JCJ5 164 aa8.06□□□□□ -1.12
SHROOM1-206ENST00000495680 CSN1S1P47710 185 aa8.06□□□□□ -1.12
SHROOM1-206ENST00000495680 FAM159AQ6UWV7 190 aa8.06□□□□□ -1.12
SHROOM1-206ENST00000495680 OR4C5Q8NGB2 326 aa8.06□□□□□ -1.12
SHROOM1-206ENST00000495680 TVP23CQ96ET8 276 aa8.06□□□□□ -1.12
SHROOM1-206ENST00000495680 HYLS1Q96M11 299 aa8.06□□□□□ -1.12
SHROOM1-206ENST00000495680 TXNDC17Q9BRA2 123 aa8.06□□□□□ -1.12
SHROOM1-206ENST00000495680 SPXQ9BT56 116 aa8.06□□□□□ -1.12
SHROOM1-206ENST00000495680 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
SHROOM1-206ENST00000495680 FAM240BA0A1B0GVZ2 78 aa8.05□□□□□ -1.12
SHROOM1-206ENST00000495680 F6UZH7 168 aa8.05□□□□□ -1.12
SHROOM1-206ENST00000495680 K7EP13 123 aa8.05□□□□□ -1.12
SHROOM1-206ENST00000495680 TYMSP04818 313 aa8.05□□□□□ -1.12
SHROOM1-206ENST00000495680 TDRG1Q3Y452 100 aa8.05□□□□□ -1.12
SHROOM1-206ENST00000495680 NHLRC2Q8NBF2 726 aa8.05□□□□□ -1.12
SHROOM1-206ENST00000495680 RPH3ALQ9UNE2 315 aa8.05□□□□□ -1.12
SHROOM1-206ENST00000495680 TRAV8-1A0A0A6YYK1 113 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 IGHV3-38A0A0C4DH36 116 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 M0R2P5 195 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 GATA1P15976 413 aaPredicted RBP8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 WFDC2Q14508 124 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 FFAR4Q5NUL3 377 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 Q6ZSN1 163 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 C10orf126Q8N4M7 172 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 Q8N814 137 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 TMEM70Q9BUB7 260 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 Q9HAA7 133 aa8.04□□□□□ -1.12
SHROOM1-206ENST00000495680 IBA57-AS1B1ANH7 110 aa8.03□□□□□ -1.12
SHROOM1-206ENST00000495680 FAM229AH3BQW9 127 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms