RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 HIF1ANQ9NWT6 349 aa11.78□□□□□ -0.52
CALD1-222ENST00000495522 TIMM8BQ9Y5J9 83 aaPredicted RBP11.78□□□□□ -0.52
CALD1-222ENST00000495522 IGHV4-30-2A0A087WSY4 118 aa11.77□□□□□ -0.53
CALD1-222ENST00000495522 LOC389332A0A1B0GUA5 103 aa11.77□□□□□ -0.53
CALD1-222ENST00000495522 K7ERU9 68 aa11.77□□□□□ -0.53
CALD1-222ENST00000495522 ZNF747Q9BV97 191 aa11.77□□□□□ -0.53
CALD1-222ENST00000495522 CKS2P33552 79 aa11.77□□□□□ -0.53
CALD1-222ENST00000495522 HIST1H1AQ02539 215 aaPredicted RBP11.77□□□□□ -0.53
CALD1-222ENST00000495522 LY6EQ16553 131 aa11.77□□□□□ -0.53
CALD1-222ENST00000495522 CST9LQ9H4G1 147 aa11.77□□□□□ -0.53
CALD1-222ENST00000495522 ZFYVE26Q68DK2 2539 aa11.76□□□□□ -0.53
CALD1-222ENST00000495522 LINC01545Q5VT33 79 aa11.76□□□□□ -0.53
CALD1-222ENST00000495522 ZNF843Q8N446 348 aa11.76□□□□□ -0.53
CALD1-222ENST00000495522 A6NDX4 124 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 H0Y8G0 127 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 H3BUA1 57 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 H3BUX3 64 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 BRI3O95415 125 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 IGHG2P01859 326 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 MSMBP08118 114 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 C9orf47Q6ZRZ4 202 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 GLMPQ8WWB7 406 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 hDV102S1A0JD36 115 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 FAM106AQ4KMX7 169 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 USMG5Q96IX5 58 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 C16orf92Q96LL3 132 aa11.75□□□□□ -0.53
CALD1-222ENST00000495522 A0A096LNJ9 63 aa11.74□□□□□ -0.53
CALD1-222ENST00000495522 NDUFA4O00483 81 aa11.74□□□□□ -0.53
CALD1-222ENST00000495522 LOXL1Q08397 574 aaPredicted RBP11.74□□□□□ -0.53
CALD1-222ENST00000495522 C9orf139Q6ZV77 190 aa11.74□□□□□ -0.53
CALD1-222ENST00000495522 MSRB1Q9NZV6 116 aa11.74□□□□□ -0.53
CALD1-222ENST00000495522 SMKR1H3BMG3 65 aa11.74□□□□□ -0.53
CALD1-222ENST00000495522 NPYP01303 97 aa11.74□□□□□ -0.53
CALD1-222ENST00000495522 PPIFP30405 207 aaKnown RBP11.74□□□□□ -0.53
CALD1-222ENST00000495522 VPS13CQ709C8 3753 aa11.73□□□□□ -0.53
CALD1-222ENST00000495522 IGKV3D-20A0A0C4DH25 116 aa11.73□□□□□ -0.53
CALD1-222ENST00000495522 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
CALD1-222ENST00000495522 RNF185Q96GF1 192 aa11.73□□□□□ -0.53
CALD1-222ENST00000495522 MCRIP2Q9BUT9 160 aaKnown RBP11.73□□□□□ -0.53
CALD1-222ENST00000495522 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
CALD1-222ENST00000495522 NCR2O95944 276 aa11.72□□□□□ -0.53
CALD1-222ENST00000495522 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
CALD1-222ENST00000495522 C11orf21Q9P2W6 132 aa11.72□□□□□ -0.53
CALD1-222ENST00000495522 HBDP02042 147 aa11.72□□□□□ -0.53
CALD1-222ENST00000495522 HINT1P49773 126 aaPredicted RBP11.72□□□□□ -0.53
CALD1-222ENST00000495522 COL12A1Q99715 3063 aa11.71□□□□□ -0.53
CALD1-222ENST00000495522 SMAD7O15105 426 aaKnown RBP11.71□□□□□ -0.53
CALD1-222ENST00000495522 TMEM95Q3KNT9 176 aa11.71□□□□□ -0.53
CALD1-222ENST00000495522 PRSS57Q6UWY2 283 aa11.71□□□□□ -0.53
CALD1-222ENST00000495522 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.53
CALD1-222ENST00000495522 B4DSR2 109 aa11.71□□□□□ -0.54
CALD1-222ENST00000495522 SLC25A34Q6PIV7 304 aa11.71□□□□□ -0.54
CALD1-222ENST00000495522 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.54
CALD1-222ENST00000495522 PMCHL2Q9BQD1 86 aa11.71□□□□□ -0.54
CALD1-222ENST00000495522 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.54
CALD1-222ENST00000495522 SCRT2Q9NQ03 307 aa11.71□□□□□ -0.54
CALD1-222ENST00000495522 LENEPQ9Y5L5 61 aa11.71□□□□□ -0.54
CALD1-222ENST00000495522 ZFHX3Q15911 3703 aa11.71□□□□□ -0.54
CALD1-222ENST00000495522 PF4V1P10720 104 aa11.7□□□□□ -0.54
CALD1-222ENST00000495522 BLCAPP62952 87 aa11.7□□□□□ -0.54
CALD1-222ENST00000495522 C20orf173Q96LM9 149 aa11.7□□□□□ -0.54
CALD1-222ENST00000495522 CELSR1Q9NYQ6 3014 aa11.7□□□□□ -0.54
CALD1-222ENST00000495522 IGHV3-11P01762 117 aa11.69□□□□□ -0.54
CALD1-222ENST00000495522 DSCR9P59020 149 aa11.69□□□□□ -0.54
CALD1-222ENST00000495522 KLK15Q9H2R5 256 aa11.69□□□□□ -0.54
CALD1-222ENST00000495522 FOXE3Q13461 319 aa11.69□□□□□ -0.54
CALD1-222ENST00000495522 GPHB5Q86YW7 130 aa11.69□□□□□ -0.54
CALD1-222ENST00000495522 OR4X2Q8NGF9 303 aa11.69□□□□□ -0.54
CALD1-222ENST00000495522 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
CALD1-222ENST00000495522 TP73-AS1Q9UF72 201 aa11.69□□□□□ -0.54
CALD1-222ENST00000495522 A0A0G2JLM5 398 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 IGLV1-40P01703 118 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 GATA3P23771 443 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 DOPEY1Q5JWR5 2465 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 IGHV7-4-1A0A0J9YVY3 117 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 LINC01546A6NGU7 62 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 SOCS3O14543 225 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 LGALS9CQ6DKI2 356 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 Q6ZS46 218 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 LINC00477Q96M19 166 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 CLUHP3Q96NS8 147 aa11.68□□□□□ -0.54
CALD1-222ENST00000495522 OVOL1O14753 267 aa11.67□□□□□ -0.54
CALD1-222ENST00000495522 TNFRSF6BO95407 300 aa11.67□□□□□ -0.54
CALD1-222ENST00000495522 AVPP01185 164 aa11.67□□□□□ -0.54
CALD1-222ENST00000495522 FXYD7P58549 80 aa11.67□□□□□ -0.54
CALD1-222ENST00000495522 OR10J6PQ8NGY7 276 aa11.67□□□□□ -0.54
CALD1-222ENST00000495522 NXT2Q9NPJ8 142 aaKnown RBP11.67□□□□□ -0.54
CALD1-222ENST00000495522 SCGB1A1P11684 91 aa11.67□□□□□ -0.54
CALD1-222ENST00000495522 VAMP3Q15836 100 aa11.67□□□□□ -0.54
CALD1-222ENST00000495522 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
CALD1-222ENST00000495522 KMT2BQ9UMN6 2715 aaPredicted RBP11.67□□□□□ -0.54
CALD1-222ENST00000495522 SNAI2O43623 268 aa11.66□□□□□ -0.54
CALD1-222ENST00000495522 GAS8-AS1O95177 125 aa11.66□□□□□ -0.54
CALD1-222ENST00000495522 CACNG7P62955 275 aa11.66□□□□□ -0.54
CALD1-222ENST00000495522 CFHR3Q02985 330 aa11.66□□□□□ -0.54
CALD1-222ENST00000495522 PRR9Q5T870 116 aa11.66□□□□□ -0.54
CALD1-222ENST00000495522 ZNF462Q96JM2 2506 aa11.66□□□□□ -0.54
CALD1-222ENST00000495522 FLNCQ14315 2725 aa11.65□□□□□ -0.54
CALD1-222ENST00000495522 IGHV4-4A0A075B6R2 117 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 262.9 ms