RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 HBBP68871 147 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-214ENST00000495485 IGFL4Q6B9Z1 124 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 RNF182Q8N6D2 247 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 NUP35Q8NFH5 326 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 NEU1Q99519 415 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 VGLL1Q99990 258 aa7.77□□□□□ -1.17
HDAC3-214ENST00000495485 MRPL18Q9H0U6 180 aaKnown RBP7.77□□□□□ -1.17
HDAC3-214ENST00000495485 TMEM213A2RRL7 107 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 C2orf70A6NJV1 201 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 SOCS3O14543 225 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 HOXA5P20719 270 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 HLA-DMBP28068 263 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 S100A2P29034 98 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 EBLN2Q6P2I7 272 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 DYNLRB2Q8TF09 96 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 AGPAT4-IT1Q9H0P7 198 aa7.76□□□□□ -1.17
HDAC3-214ENST00000495485 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 SH2D1AO60880 128 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 DUSP14O95147 198 aaKnown RBP7.75□□□□□ -1.17
HDAC3-214ENST00000495485 APCSP02743 223 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 CRISP2P16562 243 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 ERCC8Q13216 396 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 TCTEX1D4Q5JR98 221 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 PRR31Q5SQ13 230 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
HDAC3-214ENST00000495485 LINC00322Q6ZN03 302 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-214ENST00000495485 OR8A1Q8NGG7 326 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 OR9G4Q8NGQ1 327 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 PGLYRP4Q96LB8 373 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 MS4A6AQ9H2W1 248 aa7.75□□□□□ -1.17
HDAC3-214ENST00000495485 IGKV3-7A0A075B6H7 116 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 TRAV25A0A0B4J276 109 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 TRAV21A0A0B4J279 112 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 F2Z2F3 143 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 SPINK4O60575 86 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 CA1P00915 261 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-214ENST00000495485 ORM1P02763 201 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 TSPOP30536 169 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 AKR1D1P51857 326 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 CMC4P56277 68 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-214ENST00000495485 TMEM136Q6ZRR5 245 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 WFDC3Q8IUB2 231 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 SORL1Q92673 2214 aa7.74□□□□□ -1.17
HDAC3-214ENST00000495485 PRAC2D3DTV9 90 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 K7EQG2 157 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 PHOX2AO14813 284 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 GPX1P07203 203 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 CD28P10747 220 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 LEPP41159 167 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 SLURP1P55000 103 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 OR10J3Q5JRS4 329 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 COA6Q5JTJ3 125 aaKnown RBP7.73□□□□□ -1.17
HDAC3-214ENST00000495485 Q8TAT8 98 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 DCANP1Q8TF63 244 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 ODF3Q96PU9 254 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 CITED2Q99967 270 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-214ENST00000495485 GPR61Q9BZJ8 451 aa7.73□□□□□ -1.17
HDAC3-214ENST00000495485 CCL24O00175 119 aa7.72□□□□□ -1.17
HDAC3-214ENST00000495485 CAMPP49913 170 aa7.72□□□□□ -1.17
HDAC3-214ENST00000495485 CRIP1P50238 77 aa7.72□□□□□ -1.17
HDAC3-214ENST00000495485 KRTAP10-3P60369 221 aa7.72□□□□□ -1.17
HDAC3-214ENST00000495485 SMIM15Q7Z3B0 74 aa7.72□□□□□ -1.17
HDAC3-214ENST00000495485 FER1L6-AS1Q8NA97 138 aa7.72□□□□□ -1.17
HDAC3-214ENST00000495485 C20orf173Q96LM9 149 aa7.72□□□□□ -1.17
HDAC3-214ENST00000495485 SIGLEC8Q9NYZ4 499 aa7.72□□□□□ -1.17
HDAC3-214ENST00000495485 A0A1B0GXF2 115 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 OR4C46A6NHA9 309 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 Q0VG73 95 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 DEFB136Q30KP8 78 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 PSMG4Q5JS54 123 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 FOXI2Q6ZQN5 318 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 BAGE3Q86Y29 109 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 GTSF1Q8WW33 167 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 DLX4Q92988 240 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-214ENST00000495485 TMEM18Q96B42 140 aa7.71□□□□□ -1.18
HDAC3-214ENST00000495485 SPAG8Q99932 426 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-214ENST00000495485 MCRIP2Q9BUT9 160 aaKnown RBP7.71□□□□□ -1.18
HDAC3-214ENST00000495485 CSN3P07498 182 aa7.7□□□□□ -1.18
HDAC3-214ENST00000495485 TFPI2P48307 235 aa7.7□□□□□ -1.18
HDAC3-214ENST00000495485 CACNG7P62955 275 aa7.7□□□□□ -1.18
HDAC3-214ENST00000495485 FHL3Q13643 280 aa7.7□□□□□ -1.18
HDAC3-214ENST00000495485 DMRTA1Q5VZB9 504 aa7.7□□□□□ -1.18
HDAC3-214ENST00000495485 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
HDAC3-214ENST00000495485 KCNS1Q96KK3 526 aa7.7□□□□□ -1.18
HDAC3-214ENST00000495485 TPPP3Q9BW30 176 aa7.7□□□□□ -1.18
HDAC3-214ENST00000495485 ZMAT5Q9UDW3 170 aaKnown RBP7.7□□□□□ -1.18
HDAC3-214ENST00000495485 FBN3Q75N90 2809 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 DNAH3Q8TD57 4116 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 TMSB15BA0A087X1C1 80 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 A0A0J9YX75 114 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 A0A1W2PRX2 142 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 ADARB2-AS1A8MUL3 147 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms