RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SMPXQ9UHP9 88 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 TRBV7-9A0A0J9YWB2 115 aa12.35□□□□□ -0.43
CBX4-204ENST00000495122 ZNF207O43670 478 aaKnown RBP12.35□□□□□ -0.43
CBX4-204ENST00000495122 PAFAH1B2P68402 229 aa12.35□□□□□ -0.43
CBX4-204ENST00000495122 GTSF1Q8WW33 167 aa12.35□□□□□ -0.43
CBX4-204ENST00000495122 ASCL2Q99929 193 aa12.35□□□□□ -0.43
CBX4-204ENST00000495122 A0A1B0GUT8 65 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 SOCS3O14543 225 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 SH2D1AO60880 128 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 FABP4P15090 132 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 ZNF138P52744 262 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 S100A12P80511 92 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 HIST1H1AQ02539 215 aaPredicted RBP12.34□□□□□ -0.43
CBX4-204ENST00000495122 TMEM95Q3KNT9 176 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 GFI1BQ5VTD9 330 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 TCF24Q7RTU0 167 aa12.34□□□□□ -0.43
CBX4-204ENST00000495122 IGHV3-66A0A0C4DH42 116 aa12.33□□□□□ -0.44
CBX4-204ENST00000495122 FABP5P3A8MUU1 101 aa12.33□□□□□ -0.44
CBX4-204ENST00000495122 CRIP1P50238 77 aa12.33□□□□□ -0.44
CBX4-204ENST00000495122 OR10D4PQ8NGN7 298 aa12.33□□□□□ -0.44
CBX4-204ENST00000495122 LINC00477Q96M19 166 aa12.33□□□□□ -0.44
CBX4-204ENST00000495122 C8orf49Q96NF6 230 aa12.33□□□□□ -0.44
CBX4-204ENST00000495122 VGLL1Q99990 258 aa12.33□□□□□ -0.44
CBX4-204ENST00000495122 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
CBX4-204ENST00000495122 SPINK4O60575 86 aa12.32□□□□□ -0.44
CBX4-204ENST00000495122 AMBPP02760 352 aa12.32□□□□□ -0.44
CBX4-204ENST00000495122 ID1P41134 155 aa12.32□□□□□ -0.44
CBX4-204ENST00000495122 KLF5Q13887 457 aaPredicted RBP12.32□□□□□ -0.44
CBX4-204ENST00000495122 PGLYRP4Q96LB8 373 aa12.32□□□□□ -0.44
CBX4-204ENST00000495122 IGHV3OR16-13A0A075B7E8 117 aa12.31□□□□□ -0.44
CBX4-204ENST00000495122 IGHV3-49A0A0A0MS15 119 aa12.31□□□□□ -0.44
CBX4-204ENST00000495122 IGHV3-74A0A0B4J1X5 117 aa12.31□□□□□ -0.44
CBX4-204ENST00000495122 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
CBX4-204ENST00000495122 RPLP1P05386 114 aaKnown RBP12.31□□□□□ -0.44
CBX4-204ENST00000495122 HLA-DMBP28068 263 aa12.31□□□□□ -0.44
CBX4-204ENST00000495122 LINC01559Q495D7 138 aa12.31□□□□□ -0.44
CBX4-204ENST00000495122 BAGE3Q86Y29 109 aa12.31□□□□□ -0.44
CBX4-204ENST00000495122 CTRLP40313 264 aa12.3□□□□□ -0.44
CBX4-204ENST00000495122 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
CBX4-204ENST00000495122 RNF182Q8N6D2 247 aa12.3□□□□□ -0.44
CBX4-204ENST00000495122 ZNF738Q8NE65 137 aa12.3□□□□□ -0.44
CBX4-204ENST00000495122 OR10J6PQ8NGY7 276 aa12.3□□□□□ -0.44
CBX4-204ENST00000495122 AGPAT4-IT1Q9H0P7 198 aa12.3□□□□□ -0.44
CBX4-204ENST00000495122 PRAC2D3DTV9 90 aa12.29□□□□□ -0.44
CBX4-204ENST00000495122 FRMD6-AS1P0C7T7 363 aa12.29□□□□□ -0.44
CBX4-204ENST00000495122 SRIP30626 198 aa12.29□□□□□ -0.44
CBX4-204ENST00000495122 SLAQ13239 276 aa12.29□□□□□ -0.44
CBX4-204ENST00000495122 IGFL4Q6B9Z1 124 aa12.29□□□□□ -0.44
CBX4-204ENST00000495122 ZNF493Q6ZR52 646 aa12.29□□□□□ -0.44
CBX4-204ENST00000495122 LCNL1Q6ZST4 164 aa12.29□□□□□ -0.44
CBX4-204ENST00000495122 Q8TAT8 98 aa12.29□□□□□ -0.44
CBX4-204ENST00000495122 F2Z2F3 143 aa12.28□□□□□ -0.44
CBX4-204ENST00000495122 CAMPP49913 170 aa12.28□□□□□ -0.44
CBX4-204ENST00000495122 JOSD1Q15040 202 aaPredicted RBP12.28□□□□□ -0.44
CBX4-204ENST00000495122 TM4SF20Q53R12 229 aa12.28□□□□□ -0.44
CBX4-204ENST00000495122 GDF5OSQ5U4N7 250 aa12.28□□□□□ -0.44
CBX4-204ENST00000495122 CNFNQ9BYD5 112 aa12.28□□□□□ -0.44
CBX4-204ENST00000495122 TMEM213A2RRL7 107 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 GRIFINA4D1Z8 144 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 IGLC6P0CF74 106 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 ERCC8Q13216 396 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 PYY3Q5JQD4 70 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 KLHDC1Q8N7A1 406 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 KCNS1Q96KK3 526 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 ALKBH7Q9BT30 221 aaPredicted RBP12.27□□□□□ -0.45
CBX4-204ENST00000495122 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
CBX4-204ENST00000495122 LOC102724200A0A096LPH7 203 aaPredicted RBP12.26□□□□□ -0.45
CBX4-204ENST00000495122 SERF1AO75920 110 aa12.26□□□□□ -0.45
CBX4-204ENST00000495122 TMEM256Q8N2U0 113 aa12.26□□□□□ -0.45
CBX4-204ENST00000495122 FER1L6-AS1Q8NA97 138 aa12.26□□□□□ -0.45
CBX4-204ENST00000495122 C18orf32Q8TCD1 76 aa12.26□□□□□ -0.45
CBX4-204ENST00000495122 ODF3Q96PU9 254 aa12.26□□□□□ -0.45
CBX4-204ENST00000495122 NIT2Q9NQR4 276 aa12.26□□□□□ -0.45
CBX4-204ENST00000495122 DNAH3Q8TD57 4116 aa12.26□□□□□ -0.45
CBX4-204ENST00000495122 TRAV2A0A0B4J234 112 aa12.25□□□□□ -0.45
CBX4-204ENST00000495122 ARMS2P0C7Q2 107 aa12.25□□□□□ -0.45
CBX4-204ENST00000495122 GZMBP10144 247 aa12.25□□□□□ -0.45
CBX4-204ENST00000495122 ZNF80P51504 273 aaPredicted RBP12.25□□□□□ -0.45
CBX4-204ENST00000495122 RPL11P62913 178 aaKnown RBP12.25□□□□□ -0.45
CBX4-204ENST00000495122 HIST2H2BDQ6DRA6 164 aa12.25□□□□□ -0.45
CBX4-204ENST00000495122 C10orf99Q6UWK7 81 aa12.25□□□□□ -0.45
CBX4-204ENST00000495122 APRG1Q8IVJ8 170 aa12.25□□□□□ -0.45
CBX4-204ENST00000495122 IGHV4OR15-8A0A075B7B6 117 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 A0A087WW49 117 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 ORM1P02763 201 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 HOXD3P31249 432 aaPredicted RBP12.24□□□□□ -0.45
CBX4-204ENST00000495122 LINC00310P59036 64 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 KIAA1644Q3SXP7 199 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 LYZL1Q6UWQ5 148 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 OR8A1Q8NGG7 326 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 DCANP1Q8TF63 244 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 C20orf173Q96LM9 149 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 FAM19A4Q96LR4 140 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 PEMTQ9UBM1 199 aa12.24□□□□□ -0.45
CBX4-204ENST00000495122 LINC01619G3V211 115 aa12.23□□□□□ -0.45
CBX4-204ENST00000495122 RAB4AP20338 218 aa12.23□□□□□ -0.45
CBX4-204ENST00000495122 SNRPD3P62318 126 aaKnown RBP12.23□□□□□ -0.45
CBX4-204ENST00000495122 C11orf44Q8N8P7 122 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms