RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 OR8B3Q8NGG8 313 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 OR51A2Q8NGJ7 313 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 OR4X1Q8NH49 305 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 MRPL57Q9BQC6 102 aaKnown RBP1.82□□□□□ -2.12
SMC4-224ENST00000494612 UPK3BQ9BT76 320 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 TMEM147Q9BVK8 224 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 DPY30Q9C005 99 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 TMEM222Q9H0R3 208 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 DNAH1Q9P2D7 4330 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 STARD9Q9P2P6 4700 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 WNK2Q9Y3S1 2297 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 HERC2O95714 4834 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 A0A096LPI6 279 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 A0A1B0GW54 56 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 hADV38S2A0JD32 116 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 TMEM238C9JI98 176 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 NDUFB2O95178 105 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 SRP19P09132 144 aaKnown RBP1.81□□□□□ -2.12
SMC4-224ENST00000494612 PHBP35232 272 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 CSN1S1P47710 185 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 RPL19P84098 196 aaKnown RBP1.81□□□□□ -2.12
SMC4-224ENST00000494612 RUNX1Q01196 453 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 IAH1Q2TAA2 248 aaPredicted RBP1.81□□□□□ -2.12
SMC4-224ENST00000494612 SPRNQ5BIV9 151 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 TMED4Q7Z7H5 227 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 NDUFA11Q86Y39 141 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 ZNF283Q8N7M2 679 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 OR8B12Q8NGG6 310 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 OR4C16Q8NGL9 310 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 SLC25A40Q8TBP6 338 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 ERMAPQ96PL5 475 aaPredicted RBP1.81□□□□□ -2.12
SMC4-224ENST00000494612 MIEN1Q9BRT3 115 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 TTTY13Q9BZ97 58 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 OR2J1Q9GZK6 312 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 WDR61Q9GZS3 305 aaKnown RBP1.81□□□□□ -2.12
SMC4-224ENST00000494612 CCDC90BQ9GZT6 254 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 VCX3BQ9H321 246 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 CACYBPQ9HB71 228 aaKnown RBP1.81□□□□□ -2.12
SMC4-224ENST00000494612 IDI2-AS1Q9NZ38 188 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 RYR1P21817 5038 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 HECTD4Q9Y4D8 3996 aa1.81□□□□□ -2.12
SMC4-224ENST00000494612 DOCK11Q5JSL3 2073 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 TRAV26-2A0A0B4J265 109 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 EXOC1LA0A1B0GW35 172 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 FNDC10F2Z333 226 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 H3BQF6 201 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 H3BUX3 64 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 OR2T1O43869 369 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 DBIP07108 87 aaKnown RBP1.8□□□□□ -2.12
SMC4-224ENST00000494612 LINC00032P0C843 101 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 GZMBP10144 247 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 BLVRBP30043 206 aaPredicted RBP1.8□□□□□ -2.12
SMC4-224ENST00000494612 RBM11P57052 281 aaKnown RBP1.8□□□□□ -2.12
SMC4-224ENST00000494612 KRTAP12-1P59990 96 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 HBA1P69905 142 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 KRR1Q13601 381 aaKnown RBP1.8□□□□□ -2.12
SMC4-224ENST00000494612 HES1Q14469 280 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 LGALS9BQ3B8N2 356 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 PABPC1L2AQ5JQF8 200 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 TMEM42Q69YG0 159 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 LGALS9CQ6DKI2 356 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 DHRS4L2Q6PKH6 230 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 Q6ZS49 121 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 ZCCHC23Q6ZST2 131 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 C2orf91Q6ZV80 131 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 VMO1Q7Z5L0 202 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 CLECL1Q8IZS7 167 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 LRRC18Q8N456 261 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 ZNF676Q8N7Q3 588 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 WFDC9Q8NEX5 89 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 C11orf68Q9H3H3 251 aaKnown RBP1.8□□□□□ -2.12
SMC4-224ENST00000494612 ARMC1Q9NVT9 282 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 RSL24D1Q9UHA3 163 aaKnown RBP1.8□□□□□ -2.12
SMC4-224ENST00000494612 UTP11Q9Y3A2 253 aaKnown RBP1.8□□□□□ -2.12
SMC4-224ENST00000494612 V9GYQ6 96 aa1.8□□□□□ -2.12
SMC4-224ENST00000494612 TENM3Q9P273 2699 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 TRAV36DV7A0A075B6V5 113 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 TCRBV4S1A1TA0A5B7 111 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 GGT3PA6NGU5 568 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 ODF3BA8MYP8 253 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 H3BPC8 53 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 NPFFO15130 113 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 SERPINE1P05121 402 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 FABP1P07148 127 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 IFI30P13284 250 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 RPS4Y1P22090 263 aaKnown RBP1.79□□□□□ -2.12
SMC4-224ENST00000494612 SRP9P49458 86 aaKnown RBP1.79□□□□□ -2.12
SMC4-224ENST00000494612 DEFA3P59666 94 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 NCALDP61601 193 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 PRB3Q04118 309 aaPredicted RBP1.79□□□□□ -2.12
SMC4-224ENST00000494612 AKR1C1Q04828 323 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 OR8B8Q15620 311 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 TEX36Q5VZQ5 186 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 ZNF767PQ75MW2 155 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 OR5AS1Q8N127 324 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 GDPD1Q8N9F7 314 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 MRPL30Q8TCC3 161 aaKnown RBP1.79□□□□□ -2.12
SMC4-224ENST00000494612 NEK7Q8TDX7 302 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 PPP3R2Q96LZ3 170 aa1.79□□□□□ -2.12
SMC4-224ENST00000494612 NIPSNAP1Q9BPW8 284 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms