RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 C15orf53Q8NAA6 179 aa7.46□□□□□ -1.22
COL6A3-214ENST00000493608 Q8TAT8 98 aa7.46□□□□□ -1.22
COL6A3-214ENST00000493608 PYGO2Q9BRQ0 406 aa7.46□□□□□ -1.22
COL6A3-214ENST00000493608 ATG101Q9BSB4 218 aa7.46□□□□□ -1.22
COL6A3-214ENST00000493608 MED28Q9H204 178 aa7.46□□□□□ -1.22
COL6A3-214ENST00000493608 Q9H3A6 140 aa7.46□□□□□ -1.22
COL6A3-214ENST00000493608 TP53TG3Q9ULZ0 132 aa7.46□□□□□ -1.22
COL6A3-214ENST00000493608 RTL8CO15255 209 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 RAB2AP61019 212 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 LGALS9BQ3B8N2 356 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 ZFAND2AQ8N6M9 145 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 HYLS1Q96M11 299 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 ZNF492Q9P255 531 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 RPH3ALQ9UNE2 315 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 KLF12Q9Y4X4 402 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 DNAH2Q9P225 4427 aa7.45□□□□□ -1.22
COL6A3-214ENST00000493608 MUC4Q99102 2169 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 DNAH17Q9UFH2 4485 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 TRAV26-1A0A087WT03 109 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 A0A1W2PPV4 95 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 PGPA6NDG6 321 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 PTTG1O95997 202 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 CRISP2P16562 243 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 CSN1S1P47710 185 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 ZNF138P52744 262 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 TAS2R45P59539 299 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 ACOT6Q3I5F7 207 aaPredicted RBP7.44□□□□□ -1.22
COL6A3-214ENST00000493608 KHDC3LQ587J8 217 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 Q6ZR54 194 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 EIF4E3Q8N5X7 224 aaKnown RBP7.44□□□□□ -1.22
COL6A3-214ENST00000493608 LINC00612Q8N6U2 182 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 C11orf72Q8NBR9 251 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 TMPRSS5Q9H3S3 457 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 PLA2G2DQ9UNK4 145 aa7.44□□□□□ -1.22
COL6A3-214ENST00000493608 IGHV1OR15-1A0A075B7D0 117 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 TRGV1A0A0A0MS02 117 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 PRSS29PA6NIE9 313 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 DIRC3C9JPN6 131 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 M6PRP20645 277 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 DAZ2Q13117 558 aaKnown RBP7.43□□□□□ -1.22
COL6A3-214ENST00000493608 MUC21Q5SSG8 566 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 LINC00336Q6ZUF6 198 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 LYPD1Q8N2G4 141 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 HSD17B11Q8NBQ5 300 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 SYT8Q8NBV8 401 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 OR10G4Q8NGN3 311 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 OR10G9Q8NGN4 311 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 OR10G7Q8NGN6 311 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 GNPNAT1Q96EK6 184 aaPredicted RBP7.43□□□□□ -1.22
COL6A3-214ENST00000493608 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
COL6A3-214ENST00000493608 TRGV2A0A075B6R0 118 aa7.42□□□□□ -1.22
COL6A3-214ENST00000493608 NMBP08949 121 aa7.42□□□□□ -1.22
COL6A3-214ENST00000493608 CCL18P55774 89 aa7.42□□□□□ -1.22
COL6A3-214ENST00000493608 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
COL6A3-214ENST00000493608 ZNF680Q8NEM1 530 aa7.42□□□□□ -1.22
COL6A3-214ENST00000493608 LINC00467Q9BRT7 94 aa7.42□□□□□ -1.22
COL6A3-214ENST00000493608 FAT2Q9NYQ8 4349 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 ATP6V0CP27449 155 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 GNG5P63218 68 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 GOLT1AQ6ZVE7 132 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 ZNRF2Q8NHG8 242 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 CMTM2Q8TAZ6 248 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 RXFP4Q8TDU9 374 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 SGK494Q96LW2 274 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 ARPC5LQ9BPX5 153 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 OTORQ9NRC9 128 aa7.41□□□□□ -1.22
COL6A3-214ENST00000493608 MRPL16Q9NX20 251 aaKnown RBP7.41□□□□□ -1.22
COL6A3-214ENST00000493608 TRAV8-1A0A0A6YYK1 113 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 A0A1B0GVY2 172 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 RBAKDNA6NC62 111 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 SPINK4O60575 86 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 ARL14EPLP0DKL9 152 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 TCL1AP56279 114 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 PQLC2Q6ZP29 291 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 AQP10Q96PS8 301 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 SH3BGRL3Q9H299 93 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 MDFICQ9P1T7 246 aa7.4□□□□□ -1.22
COL6A3-214ENST00000493608 FXYD6-FXYD2A0A087WZ82 144 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 NBDYA0A0U1RRE5 68 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 GIPP09681 153 aaPredicted RBP7.39□□□□□ -1.23
COL6A3-214ENST00000493608 CDC34P49427 236 aaPredicted RBP7.39□□□□□ -1.23
COL6A3-214ENST00000493608 FAM3BP58499 235 aaPredicted RBP7.39□□□□□ -1.23
COL6A3-214ENST00000493608 ZNF266Q14584 549 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 TMEM183BQ1AE95 376 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 ESRGQ1W209 222 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 FAM74A1Q5RGS3 127 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 IBA57Q5T440 356 aaKnown RBP7.39□□□□□ -1.23
COL6A3-214ENST00000493608 RPL7L1Q6DKI1 246 aaKnown RBP7.39□□□□□ -1.23
COL6A3-214ENST00000493608 TMEM183AQ8IXX5 376 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 RAB24Q969Q5 203 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 TVP23CQ96ET8 276 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 NAGKQ9UJ70 344 aa7.39□□□□□ -1.23
COL6A3-214ENST00000493608 TRBV7-9A0A0J9YWB2 115 aa7.38□□□□□ -1.23
COL6A3-214ENST00000493608 F6UZH7 168 aa7.38□□□□□ -1.23
COL6A3-214ENST00000493608 GNRH2O43555 120 aa7.38□□□□□ -1.23
COL6A3-214ENST00000493608 PLA2G1BP04054 148 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms