RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 HOXA3O43365 443 aaPredicted RBP7.63□□□□□ -1.19
PRPF3-206ENST00000493553 IGKV2D-40P01614 121 aaPredicted RBP7.63□□□□□ -1.19
PRPF3-206ENST00000493553 IGHV3-11P01762 117 aa7.63□□□□□ -1.19
PRPF3-206ENST00000493553 SRIP30626 198 aa7.63□□□□□ -1.19
PRPF3-206ENST00000493553 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
PRPF3-206ENST00000493553 LINC00322Q6ZN03 302 aaPredicted RBP7.63□□□□□ -1.19
PRPF3-206ENST00000493553 ZNF738Q8NE65 137 aa7.63□□□□□ -1.19
PRPF3-206ENST00000493553 GTSF1Q8WW33 167 aa7.63□□□□□ -1.19
PRPF3-206ENST00000493553 ZNF702PQ9H963 129 aa7.63□□□□□ -1.19
PRPF3-206ENST00000493553 TRAV8-2A0A0B4J237 113 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 CD5LO43866 347 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 SERF1AO75920 110 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 CTRLP40313 264 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 SNRPD3P62318 126 aaKnown RBP7.62□□□□□ -1.19
PRPF3-206ENST00000493553 PYY3Q5JQD4 70 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 ZNF493Q6ZR52 646 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 SMIM15Q7Z3B0 74 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 FER1L6-AS1Q8NA97 138 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 CHCHD1Q96BP2 118 aaKnown RBP7.62□□□□□ -1.19
PRPF3-206ENST00000493553 KCNS1Q96KK3 526 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 VGLL1Q99990 258 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 ALKBH7Q9BT30 221 aaPredicted RBP7.62□□□□□ -1.19
PRPF3-206ENST00000493553 TMEM160Q9NX00 188 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 MYO9AB2RTY4 2548 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 CCDC168Q8NDH2 2452 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 DOPEY2Q9Y3R5 2298 aa7.62□□□□□ -1.19
PRPF3-206ENST00000493553 IGHV3OR16-8A0A075B7F1 116 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 LOC102724200A0A096LPH7 203 aaPredicted RBP7.61□□□□□ -1.19
PRPF3-206ENST00000493553 ZNF207O43670 478 aaKnown RBP7.61□□□□□ -1.19
PRPF3-206ENST00000493553 ORM1P02763 201 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 PPBPP02775 128 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 OR5AL1P0C617 328 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 CRIP1P50238 77 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 SLAQ13239 276 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 UNQ9165/PRO28630Q6UXU0 137 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 MAPK1IP1LQ8NDC0 245 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 CNFNQ9BYD5 112 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 AGPAT4-IT1Q9H0P7 198 aa7.61□□□□□ -1.19
PRPF3-206ENST00000493553 HELZ2Q9BYK8 2649 aaKnown RBP7.61□□□□□ -1.19
PRPF3-206ENST00000493553 TRAV2A0A0B4J234 112 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 IGHV3-66A0A0C4DH42 116 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 GRIFINA4D1Z8 144 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 ZNF705FA8MVS1 300 aaPredicted RBP7.6□□□□□ -1.19
PRPF3-206ENST00000493553 TSTD3H0UI37 97 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 ZNF324O75467 553 aaPredicted RBP7.6□□□□□ -1.19
PRPF3-206ENST00000493553 HSBP1O75506 76 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 TRBV12-3P01733 135 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 APOHP02749 345 aaPredicted RBP7.6□□□□□ -1.19
PRPF3-206ENST00000493553 GPX1P07203 203 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 CACNG7P62955 275 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 IL17RELQ6ZVW7 336 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 TMEM256Q8N2U0 113 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 C18orf32Q8TCD1 76 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 ODF3Q96PU9 254 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 PEMTQ9UBM1 199 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 LAMTOR2Q9Y2Q5 125 aa7.6□□□□□ -1.19
PRPF3-206ENST00000493553 KMT2BQ9UMN6 2715 aaPredicted RBP7.59□□□□□ -1.19
PRPF3-206ENST00000493553 IGHV3OR16-13A0A075B7E8 117 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 IGHV3-74A0A0B4J1X5 117 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 TRAV21A0A0B4J279 112 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 SOCS3O14543 225 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 DUSP14O95147 198 aaKnown RBP7.59□□□□□ -1.19
PRPF3-206ENST00000493553 IGLC6P0CF74 106 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 TSPOP30536 169 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 IGFL4Q6B9Z1 124 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 RNF182Q8N6D2 247 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 WFDC11Q8NEX6 87 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 OR8A1Q8NGG7 326 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 DPF1Q92782 380 aa7.59□□□□□ -1.19
PRPF3-206ENST00000493553 PRAC2D3DTV9 90 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 ARMS2P0C7Q2 107 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 GZMBP10144 247 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 LEPP41159 167 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 AMTP48728 403 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 PKIAP61925 76 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 KIAA1644Q3SXP7 199 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 GDF5OSQ5U4N7 250 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 LYZL1Q6UWQ5 148 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 KLHDC1Q8N7A1 406 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 Q8TAT8 98 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 ZNF418Q8TF45 676 aaPredicted RBP7.58□□□□□ -1.2
PRPF3-206ENST00000493553 C4orf3Q8WVX3 66 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 TPPP3Q9BW30 176 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 TMEM191AQ9H0A3 160 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 GSN-AS1Q9NRJ2 163 aa7.58□□□□□ -1.2
PRPF3-206ENST00000493553 PCP4L1A6NKN8 68 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 LINC01619G3V211 115 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 SCGB1D1O95968 90 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 FRMD6-AS1P0C7T7 363 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 HLA-DMBP28068 263 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 ERCC8Q13216 396 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 TMEM95Q3KNT9 176 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 FAM104BQ5XKR9 115 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 EBLN2Q6P2I7 272 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 APRG1Q8IVJ8 170 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 ORMDL3Q8N138 153 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 NAGKQ9UJ70 344 aa7.57□□□□□ -1.2
PRPF3-206ENST00000493553 UTP20O75691 2785 aaKnown RBP7.57□□□□□ -1.2
PRPF3-206ENST00000493553 TLN2Q9Y4G6 2542 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms