RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 FER1L6Q2WGJ9 1857 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 HMCN2Q8NDA2 5059 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 TCOF1Q13428 1488 aaKnown RBP-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 YTHDC2Q9H6S0 1430 aaKnown RBP-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 A0A1W2PPB8 328 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 A0A1W2PRS3 328 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 HIGD1CA8MV81 97 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 KIR3DP1A8MWS1 328 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 E2F6O75461 281 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 CD3DP04234 171 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 PPP1R2P41236 205 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 NDUFA6P56556 154 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 DNAJB13P59910 316 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 SNRPD3P62318 126 aaKnown RBP-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 KLKP1Q107X0 134 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 POU6F1Q14863 301 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 SNCBQ16143 134 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 LTC4SQ16873 150 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 C3orf62Q6ZUJ4 267 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 NEK7Q8TDX7 302 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 SS18L2Q9UHA2 77 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 MPC1Q9Y5U8 109 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 RREB1Q92766 1687 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 WDR97A6NE52 1622 aa-0.27□□□□□ -2.45
SYCP1-208ENST00000493377 FAM208BQ5VWN6 2430 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 C3orf85A0A1B0GTC6 90 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 LOC101927531A0A1B0GV80 90 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 TRDV1A0A1B0GX56 115 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 ARL5CA6NH57 179 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 MT-ND6P03923 174 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 GNG3P63215 75 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 RPL19P84098 196 aaKnown RBP-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 TMED4Q7Z7H5 227 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 CLEC2BQ92478 149 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 BORCS8Q96FH0 119 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 CHMP6Q96FZ7 201 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 DMAC1Q96GE9 116 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 CEP19Q96LK0 163 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 MRPL36Q9P0J6 103 aaKnown RBP-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 U3KQA8 63 aa-0.28□□□□□ -2.45
SYCP1-208ENST00000493377 PLXNA2O75051 1894 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 TECPR2O15040 1411 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 BLMP54132 1417 aaPredicted RBP-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 FGD6Q6ZV73 1430 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 F5P12259 2224 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 LOC107984156A0A0G2JMH3 177 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 IFITM5A6NNB3 132 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 MCRIP1C9JLW8 97 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 H7BYZ3 331 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 TPT1P13693 172 aaKnown RBP-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 MAXP61244 160 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 ARL17AQ8IVW1 177 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 BOLA2Q9H3K6 86 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 TMEM14BQ9NUH8 114 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 UNC13BO14795 1591 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 DLC1Q96QB1 1528 aa-0.29□□□□□ -2.46
SYCP1-208ENST00000493377 CPDO75976 1380 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 HELZP42694 1942 aaKnown RBP-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 PLXNA1Q9UIW2 1896 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 LAMC3Q9Y6N6 1575 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 NCOR1O75376 2440 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 TRBV7-6A0A0J9YX20 115 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 TRBV27A0A0K0K1C4 114 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 TMEM30CPA0ZSE6 113 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 BBIP1A8MTZ0 92 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 BCL2P10415 239 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 GLRXP35754 106 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 TCTAP57738 103 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 RHOHQ15669 191 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 LYPD5Q6UWN5 251 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 SMIM20Q8N5G0 67 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 MORN4Q8NDC4 146 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 OR5H6Q8NGV6 325 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 AP3S1Q92572 193 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 PRELID3AQ96N28 172 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 UFC1Q9Y3C8 167 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 KIDINS220Q9ULH0 1771 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 TNS1Q9HBL0 1735 aaKnown RBP-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 PTPRGP23470 1445 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 FAM135BQ49AJ0 1406 aa-0.3□□□□□ -2.46
SYCP1-208ENST00000493377 SYNMO15061 1565 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 LOC107986453A0A1B0GWG9 222 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 TMEM189A5PLL7 270 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 C5orf58C9J3I9 102 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 PGRMC1O00264 195 aaKnown RBP-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 TPST1O60507 370 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 MPC1LP0DKB6 136 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 FABP2P12104 132 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 SRP9P49458 86 aaKnown RBP-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 KRTAP19-7Q3SYF9 63 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 CROCCP2Q86T23 111 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 OR8J3Q8NGG0 315 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 BIN3Q9NQY0 253 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 COMMD3Q9UBI1 195 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 STOML2Q9UJZ1 356 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 CDK12Q9NYV4 1490 aaPredicted RBP-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 SOGA1O94964 1423 aa-0.31□□□□□ -2.46
SYCP1-208ENST00000493377 FLNCQ14315 2725 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms