RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 EDN2P20800 178 aa10.61□□□□□ -0.71
PTPN7-216ENST00000492977 SRIP30626 198 aa10.61□□□□□ -0.71
PTPN7-216ENST00000492977 BAGE3Q86Y29 109 aa10.61□□□□□ -0.71
PTPN7-216ENST00000492977 TP53TG3Q9ULZ0 132 aa10.61□□□□□ -0.71
PTPN7-216ENST00000492977 RNASE1P07998 156 aaKnown RBP10.6□□□□□ -0.71
PTPN7-216ENST00000492977 TCTEX1D4Q5JR98 221 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 GATD1Q8NB37 220 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 SSBP4Q9BWG4 385 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-216ENST00000492977 ITPR2Q14571 2701 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 TMSB15BA0A087X1C1 80 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 TRBV7-9A0A0J9YWB2 115 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 A0A1B0GUS0 222 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 C2orf70A6NJV1 201 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 LINC01619G3V211 115 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 ORM1P02763 201 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 ARMS2P0C7Q2 107 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 LYZL1Q6UWQ5 148 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 OR8A1Q8NGG7 326 aa10.6□□□□□ -0.71
PTPN7-216ENST00000492977 M0QZ24 198 aa10.59□□□□□ -0.71
PTPN7-216ENST00000492977 NUPR1O60356 82 aa10.59□□□□□ -0.71
PTPN7-216ENST00000492977 SRD5A1P18405 259 aa10.59□□□□□ -0.71
PTPN7-216ENST00000492977 PAFAH1B2P68402 229 aa10.59□□□□□ -0.71
PTPN7-216ENST00000492977 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
PTPN7-216ENST00000492977 ZNF418Q8TF45 676 aaPredicted RBP10.59□□□□□ -0.71
PTPN7-216ENST00000492977 DPF1Q92782 380 aa10.59□□□□□ -0.71
PTPN7-216ENST00000492977 ALKBH7Q9BT30 221 aaPredicted RBP10.59□□□□□ -0.71
PTPN7-216ENST00000492977 MS4A6AQ9H2W1 248 aa10.59□□□□□ -0.71
PTPN7-216ENST00000492977 C16orf95Q9H693 158 aa10.59□□□□□ -0.71
PTPN7-216ENST00000492977 SONP18583 2426 aaKnown RBP10.59□□□□□ -0.71
PTPN7-216ENST00000492977 SERF1AO75920 110 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 IGLC6P0CF74 106 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 ZNF705DP0CH99 300 aaPredicted RBP10.58□□□□□ -0.72
PTPN7-216ENST00000492977 ZNF705BP0CI00 300 aaPredicted RBP10.58□□□□□ -0.72
PTPN7-216ENST00000492977 CTRLP40313 264 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 LINC00310P59036 64 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 C18orf65Q6ZTR6 163 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 FER1L6-AS1Q8NA97 138 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 OR11H1Q8NG94 326 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 OR1N2Q8NGR9 330 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 TPPP3Q9BW30 176 aa10.58□□□□□ -0.72
PTPN7-216ENST00000492977 LCE2BO14633 110 aa10.57□□□□□ -0.72
PTPN7-216ENST00000492977 PYY3Q5JQD4 70 aa10.57□□□□□ -0.72
PTPN7-216ENST00000492977 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
PTPN7-216ENST00000492977 C18orf32Q8TCD1 76 aa10.57□□□□□ -0.72
PTPN7-216ENST00000492977 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
PTPN7-216ENST00000492977 PEMTQ9UBM1 199 aa10.57□□□□□ -0.72
PTPN7-216ENST00000492977 LOC102724200A0A096LPH7 203 aaPredicted RBP10.56□□□□□ -0.72
PTPN7-216ENST00000492977 F2Z2F3 143 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 K7EQG2 157 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 EIF4EBP3O60516 100 aaPredicted RBP10.56□□□□□ -0.72
PTPN7-216ENST00000492977 SLURP1P55000 103 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 HILS1P60008 231 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 SNRPD3P62318 126 aaKnown RBP10.56□□□□□ -0.72
PTPN7-216ENST00000492977 DEFB136Q30KP8 78 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 KHDC1LQ5JSQ8 128 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 DNLZQ5SXM8 178 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 WFDC3Q8IUB2 231 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 ZFAND2AQ8N6M9 145 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 KLHL30-AS1Q8NEE0 82 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 GCN1Q92616 2671 aaKnown RBP10.56□□□□□ -0.72
PTPN7-216ENST00000492977 IGKV3D-20A0A0C4DH25 116 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 CNFNQ9BYD5 112 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 SELENOKQ9Y6D0 94 aa10.56□□□□□ -0.72
PTPN7-216ENST00000492977 OR9G4Q8NGQ1 327 aa10.55□□□□□ -0.72
PTPN7-216ENST00000492977 JMJD8Q96S16 334 aa10.55□□□□□ -0.72
PTPN7-216ENST00000492977 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
PTPN7-216ENST00000492977 ACANP16112 2415 aa10.55□□□□□ -0.72
PTPN7-216ENST00000492977 TRAV21A0A0B4J279 112 aa10.54□□□□□ -0.72
PTPN7-216ENST00000492977 F6UB75 175 aa10.54□□□□□ -0.72
PTPN7-216ENST00000492977 LY6G6DO95868 133 aa10.54□□□□□ -0.72
PTPN7-216ENST00000492977 JOSD1Q15040 202 aaPredicted RBP10.54□□□□□ -0.72
PTPN7-216ENST00000492977 ADAMTSL5Q6ZMM2 481 aa10.54□□□□□ -0.72
PTPN7-216ENST00000492977 LINC01006Q8NI28 216 aa10.54□□□□□ -0.72
PTPN7-216ENST00000492977 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
PTPN7-216ENST00000492977 SMR3AQ99954 134 aa10.54□□□□□ -0.72
PTPN7-216ENST00000492977 FASNP49327 2511 aaKnown RBP10.53□□□□□ -0.72
PTPN7-216ENST00000492977 PCP4L1A6NKN8 68 aa10.53□□□□□ -0.72
PTPN7-216ENST00000492977 GPX1P07203 203 aa10.53□□□□□ -0.72
PTPN7-216ENST00000492977 TFPI2P48307 235 aa10.53□□□□□ -0.72
PTPN7-216ENST00000492977 DEFB1P60022 68 aa10.53□□□□□ -0.72
PTPN7-216ENST00000492977 PRR9Q5T870 116 aa10.53□□□□□ -0.72
PTPN7-216ENST00000492977 RCHY1Q96PM5 261 aa10.53□□□□□ -0.72
PTPN7-216ENST00000492977 SAMD10Q9BYL1 202 aa10.53□□□□□ -0.72
PTPN7-216ENST00000492977 TRAV2A0A0B4J234 112 aa10.52□□□□□ -0.72
PTPN7-216ENST00000492977 NDUFA7O95182 113 aa10.52□□□□□ -0.72
PTPN7-216ENST00000492977 ZNF688P0C7X2 276 aa10.52□□□□□ -0.72
PTPN7-216ENST00000492977 NTF3P20783 257 aa10.52□□□□□ -0.72
PTPN7-216ENST00000492977 TWIST1Q15672 202 aa10.52□□□□□ -0.72
PTPN7-216ENST00000492977 IQCJQ1A5X6 159 aa10.52□□□□□ -0.72
PTPN7-216ENST00000492977 PSMG4Q5JS54 123 aa10.52□□□□□ -0.72
PTPN7-216ENST00000492977 DLX4Q92988 240 aaPredicted RBP10.52□□□□□ -0.72
PTPN7-216ENST00000492977 ODF3Q96PU9 254 aa10.52□□□□□ -0.72
PTPN7-216ENST00000492977 AKAP9Q99996 3911 aa10.52□□□□□ -0.73
PTPN7-216ENST00000492977 A0A0J9YX75 114 aa10.52□□□□□ -0.73
PTPN7-216ENST00000492977 FAM104BQ5XKR9 115 aa10.52□□□□□ -0.73
PTPN7-216ENST00000492977 TSSC4Q9Y5U2 329 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms