RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 VSIG2Q96IQ7 327 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 HHLA3Q9XRX5 114 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 ICOSQ9Y6W8 199 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 PKHD1P08F94 4074 aa8.61□□□□□ -1.03
COL6A1-205ENST00000492851 UBE2L3P68036 154 aaKnown RBP8.6□□□□□ -1.03
COL6A1-205ENST00000492851 ZNF266Q14584 549 aa8.6□□□□□ -1.03
COL6A1-205ENST00000492851 MRPL23Q16540 153 aaKnown RBP8.6□□□□□ -1.03
COL6A1-205ENST00000492851 FFAR4Q5NUL3 377 aa8.6□□□□□ -1.03
COL6A1-205ENST00000492851 FAM159AQ6UWV7 190 aa8.6□□□□□ -1.03
COL6A1-205ENST00000492851 ARL6IP6Q8N6S5 226 aa8.6□□□□□ -1.03
COL6A1-205ENST00000492851 HSPB11Q9Y547 144 aa8.6□□□□□ -1.03
COL6A1-205ENST00000492851 DNAH11Q96DT5 4516 aa8.6□□□□□ -1.03
COL6A1-205ENST00000492851 TRAV9-2A0A087WT02 112 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 K7EP13 123 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 SIVA1O15304 175 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 MPC2O95563 127 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 RPL12P30050 165 aaKnown RBP8.59□□□□□ -1.03
COL6A1-205ENST00000492851 H2BFSP57053 126 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 IQCF2Q8IXL9 164 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 PHYHIPLQ96FC7 376 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 SPXQ9BT56 116 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 PTTG2Q9NZH5 202 aa8.59□□□□□ -1.03
COL6A1-205ENST00000492851 TRGV11A0A075B6L2 103 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 A0A1W2PPV4 95 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 DIRC3C9JPN6 131 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 CRYBA4P53673 196 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 ACOT6Q3I5F7 207 aaPredicted RBP8.58□□□□□ -1.04
COL6A1-205ENST00000492851 Q6AWC8 147 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 MBD2Q9UBB5 411 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
COL6A1-205ENST00000492851 TRGV4A0A0C4DH28 118 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 A6NHS1 94 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 EREGO14944 169 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 ORM1P02763 201 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 IFITM3Q01628 133 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 FHL2Q14192 279 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 PRR9Q5T870 116 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 PQLC2Q6ZP29 291 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 NEGR1Q7Z3B1 354 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 NFE4Q86UQ8 179 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 Q8TAT8 98 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 RASL10AQ92737 203 aa8.57□□□□□ -1.04
COL6A1-205ENST00000492851 MRPL16Q9NX20 251 aaKnown RBP8.57□□□□□ -1.04
COL6A1-205ENST00000492851 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
COL6A1-205ENST00000492851 PGPA6NDG6 321 aa8.56□□□□□ -1.04
COL6A1-205ENST00000492851 TDRG1Q3Y452 100 aa8.56□□□□□ -1.04
COL6A1-205ENST00000492851 LYPD5Q6UWN5 251 aa8.56□□□□□ -1.04
COL6A1-205ENST00000492851 OR10G4Q8NGN3 311 aa8.56□□□□□ -1.04
COL6A1-205ENST00000492851 PCNPQ8WW12 178 aaKnown RBP8.56□□□□□ -1.04
COL6A1-205ENST00000492851 HYLS1Q96M11 299 aa8.56□□□□□ -1.04
COL6A1-205ENST00000492851 KRTAP1-5Q9BYS1 174 aa8.56□□□□□ -1.04
COL6A1-205ENST00000492851 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
COL6A1-205ENST00000492851 TRAV21A0A0B4J279 112 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 NXPH4O95158 308 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 MUC21Q5SSG8 566 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 SH2D6Q7Z4S9 175 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 KCNS1Q96KK3 526 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 C8orf49Q96NF6 230 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 SMIM3Q9BZL3 60 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 MDFICQ9P1T7 246 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 BOLA1Q9Y3E2 137 aa8.55□□□□□ -1.04
COL6A1-205ENST00000492851 SERTM2A0A1B0GWG4 89 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 C9JCJ5 164 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 SRIP30626 198 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 LINC00315P59091 139 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 TMEM183BQ1AE95 376 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 TMEM183AQ8IXX5 376 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 MAPKAPK5-AS1Q8N8E1 139 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 LY96Q9Y6Y9 160 aa8.54□□□□□ -1.04
COL6A1-205ENST00000492851 K7EQM0 130 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 M0R2P5 195 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 CIDEAO60543 219 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 MBP02144 154 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 EVI2AP22794 236 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 Q6ZQT7 251 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 OR4C5Q8NGB2 326 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 OR10G9Q8NGN4 311 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 OR10G7Q8NGN6 311 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 NDFIP1Q9BT67 221 aa8.53□□□□□ -1.04
COL6A1-205ENST00000492851 TRAV4A0A0B4J268 109 aa8.52□□□□□ -1.05
COL6A1-205ENST00000492851 K7EQD1 137 aa8.52□□□□□ -1.05
COL6A1-205ENST00000492851 ERVFC1-1P60608 527 aa8.52□□□□□ -1.05
COL6A1-205ENST00000492851 CDPF1Q6NVV7 123 aa8.52□□□□□ -1.05
COL6A1-205ENST00000492851 ZNF479Q96JC4 524 aa8.52□□□□□ -1.05
COL6A1-205ENST00000492851 SDF2L1Q9HCN8 221 aa8.52□□□□□ -1.05
COL6A1-205ENST00000492851 TREM1Q9NP99 234 aa8.52□□□□□ -1.05
COL6A1-205ENST00000492851 NAGKQ9UJ70 344 aa8.52□□□□□ -1.05
COL6A1-205ENST00000492851 FBLL1A6NHQ2 334 aaKnown RBP8.51□□□□□ -1.05
COL6A1-205ENST00000492851 GYPEP15421 78 aa8.51□□□□□ -1.05
COL6A1-205ENST00000492851 SERF2P84101 59 aa8.51□□□□□ -1.05
COL6A1-205ENST00000492851 Q6ZRN7 208 aaPredicted RBP8.51□□□□□ -1.05
COL6A1-205ENST00000492851 GOLT1AQ6ZVE7 132 aa8.51□□□□□ -1.05
COL6A1-205ENST00000492851 Q8N1X5 172 aa8.51□□□□□ -1.05
COL6A1-205ENST00000492851 C10orf126Q8N4M7 172 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms