RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 LYPD1Q8N2G4 141 aa10□□□□□ -0.81
SSR4-212ENST00000491833 C9orf62Q8N4C0 152 aa10□□□□□ -0.81
SSR4-212ENST00000491833 RNASE8Q8TDE3 154 aaKnown RBP10□□□□□ -0.81
SSR4-212ENST00000491833 FRZBQ92765 325 aa10□□□□□ -0.81
SSR4-212ENST00000491833 FAT1Q14517 4588 aa10□□□□□ -0.81
SSR4-212ENST00000491833 CTXND1A0A1B0GTU2 59 aa9.99□□□□□ -0.81
SSR4-212ENST00000491833 HMGB3O15347 200 aaKnown RBP9.99□□□□□ -0.81
SSR4-212ENST00000491833 IGLC2P0DOY2 106 aa9.99□□□□□ -0.81
SSR4-212ENST00000491833 STOML3Q8TAV4 291 aa9.99□□□□□ -0.81
SSR4-212ENST00000491833 UMAD1C9J7I0 102 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 EREGO14944 169 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 CXorf1O96002 111 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 SEC11BP0C7V7 166 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 ARL14EPLP0DKL9 152 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 NKX2-5P52952 324 aaPredicted RBP9.98□□□□□ -0.81
SSR4-212ENST00000491833 PDE6HQ13956 83 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 ESRGQ1W209 222 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 CDPF1Q6NVV7 123 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 OR8A1Q8NGG7 326 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 FAM213BQ8TBF2 198 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 TMED6Q8WW62 240 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 RAB24Q969Q5 203 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
SSR4-212ENST00000491833 MAP1LC3B2A6NCE7 125 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 H3BNG1 76 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 H7BYZ3 331 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 MRPS12O15235 138 aaKnown RBP9.97□□□□□ -0.81
SSR4-212ENST00000491833 ZNF253O75346 499 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 EIF3GO75821 320 aaKnown RBP eCLIP9.97□□□□□ -0.81
SSR4-212ENST00000491833 CDKN1BP46527 198 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 ERVFC1-1P60608 527 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 FAM74A1Q5RGS3 127 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 FAM167A-AS1Q96KT0 104 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 MAP1LC3BQ9GZQ8 125 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 ZNF331Q9NQX6 463 aaPredicted RBP9.97□□□□□ -0.81
SSR4-212ENST00000491833 MYCBP2O75592 4640 aa9.97□□□□□ -0.81
SSR4-212ENST00000491833 TRBV19A0A075B6N1 114 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 H3BQ15 152 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 SLC17A3O00476 420 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 NBEAP1P0C6P0 100 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 HOXA5P20719 270 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 CSN1S1P47710 185 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 XGP55808 180 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 PSG3Q16557 428 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 DPPA3Q6W0C5 159 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 Q6ZRN7 208 aaPredicted RBP9.96□□□□□ -0.82
SSR4-212ENST00000491833 FXYD5Q96DB9 178 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 C20orf144Q9BQM9 153 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 PRELID1Q9Y255 219 aa9.96□□□□□ -0.82
SSR4-212ENST00000491833 GAGE12BA1L429 117 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 TEX46H3BTG2 121 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 GAGE7O76087 117 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 GAGE12FP0CL80 117 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 GAGE12GP0CL81 117 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 GAGE12IP0CL82 117 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 STAG3L2P0CL84 134 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 STAG3L3P0CL85 134 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 GCHFRP30047 84 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 CCDC28AQ8IWP9 274 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 CMTM2Q8TAZ6 248 aa9.95□□□□□ -0.82
SSR4-212ENST00000491833 RPUSD4Q96CM3 377 aaKnown RBP9.95□□□□□ -0.82
SSR4-212ENST00000491833 FUSP35637 526 aaKnown RBP eCLIP9.94□□□□□ -0.82
SSR4-212ENST00000491833 RAB5CP51148 216 aa9.94□□□□□ -0.82
SSR4-212ENST00000491833 ICAM4Q14773 271 aa9.94□□□□□ -0.82
SSR4-212ENST00000491833 PHYHIPLQ96FC7 376 aa9.94□□□□□ -0.82
SSR4-212ENST00000491833 RPH3ALQ9UNE2 315 aa9.94□□□□□ -0.82
SSR4-212ENST00000491833 VPS13BQ7Z7G8 4022 aa9.93□□□□□ -0.82
SSR4-212ENST00000491833 SIVA1O15304 175 aa9.93□□□□□ -0.82
SSR4-212ENST00000491833 FGF8P55075 233 aaPredicted RBP9.93□□□□□ -0.82
SSR4-212ENST00000491833 RANP62826 216 aaKnown RBP9.93□□□□□ -0.82
SSR4-212ENST00000491833 EXOC3-AS1Q8N2X6 119 aa9.93□□□□□ -0.82
SSR4-212ENST00000491833 MRPL53Q96EL3 112 aaKnown RBP9.93□□□□□ -0.82
SSR4-212ENST00000491833 C18orf15Q96N68 181 aa9.93□□□□□ -0.82
SSR4-212ENST00000491833 A0A1B0GV50 99 aa9.92□□□□□ -0.82
SSR4-212ENST00000491833 PRB4P10163 310 aaPredicted RBP9.92□□□□□ -0.82
SSR4-212ENST00000491833 SFT2D1Q8WV19 159 aa9.92□□□□□ -0.82
SSR4-212ENST00000491833 TMPRSS5Q9H3S3 457 aa9.92□□□□□ -0.82
SSR4-212ENST00000491833 OTORQ9NRC9 128 aa9.92□□□□□ -0.82
SSR4-212ENST00000491833 A0A096LPF7 62 aa9.91□□□□□ -0.82
SSR4-212ENST00000491833 SLC25A5P05141 298 aaKnown RBP9.91□□□□□ -0.82
SSR4-212ENST00000491833 H2AFB1P0C5Y9 115 aa9.91□□□□□ -0.82
SSR4-212ENST00000491833 GFI1BQ5VTD9 330 aa9.91□□□□□ -0.82
SSR4-212ENST00000491833 SAT2Q96F10 170 aaPredicted RBP9.91□□□□□ -0.82
SSR4-212ENST00000491833 K7EQM0 130 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 M0R3E3 92 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 NDUFB4O95168 129 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 FHITP49789 147 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 SULT1A2P50226 295 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 PPT1P50897 306 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 UBE2G2P60604 165 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 KIR3DS1Q14943 382 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 ZNF726P1Q15940 193 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 TMEM78Q5T7P6 136 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 ALKAL2Q6UX46 152 aa9.9□□□□□ -0.82
SSR4-212ENST00000491833 DNAH10OSP0CZ25 163 aa9.89□□□□□ -0.83
SSR4-212ENST00000491833 KRTAP10-1P60331 282 aa9.89□□□□□ -0.83
SSR4-212ENST00000491833 Q6ZTI0 123 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms