RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ATP6V0BQ99437 205 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 OPRPNQ99935 248 aaPredicted RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 RASL11BQ9BPW5 248 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 VPS25Q9BRG1 176 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 SHANK2-AS3Q9BTD1 123 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 MCRIP2Q9BUT9 160 aaKnown RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 MRPL20Q9BYC9 149 aaKnown RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 RAB1BQ9H0U4 201 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 VCX2Q9H322 139 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 NXT2Q9NPJ8 142 aaKnown RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 DPM3Q9P2X0 92 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 KLK9Q9UKQ9 250 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 NACAE9PAV3 2078 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 SVILO95425 2214 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 CADP27708 2225 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHV4-4A0A075B6R2 117 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A087X0K7 114 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 TRAV8-6A0A0B4J262 113 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 MUC21A0A0G2JKD1 596 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A0G2JLM5 398 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 CENPVL3A0A0U1RRI6 287 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 MUC21A0A140T8X8 626 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 LOC389332A0A1B0GUA5 103 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 OR2T8A6NH00 312 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 E7EQL1 145 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 LINC01619G3V211 115 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 M0R1W7 72 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 MRPS12O15235 138 aaKnown RBP1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNF207O43670 478 aaKnown RBP1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 GNG7O60262 68 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 FCN3O75636 299 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 IGKV1-17P01599 117 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHV3-48P01763 117 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 HBDP02042 147 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 ORM1P02763 201 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 CLEC3BP05452 202 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 CSN3P07498 182 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 CTSGP08311 255 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 SCGB1A1P11684 91 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 FABP2P12104 132 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 GP9P14770 177 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 CCL3L1P16619 93 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM11P17152 192 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 PRTN3P24158 256 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 LOXP28300 417 aaPredicted RBP1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 CACNG7P62955 275 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 GNG5P63218 68 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 HSD52Q0P140 79 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 DIAPH2-AS1Q14236 149 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 ADIPOQQ15848 244 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 MRPL51Q4U2R6 128 aaKnown RBP1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 MUC21Q5SSG8 566 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM120AOSQ5T036 256 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 UFSP1Q6NVU6 142 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 SIGLEC15Q6ZMC9 328 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 ADAMTSL5Q6ZMM2 481 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 GOLT1AQ6ZVE7 132 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 EXOC3-AS1Q8N2X6 119 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 KIR3DL3Q8N743 410 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM216BQ8N7L0 139 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 Q8N8P6 123 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 RPEQ96AT9 228 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 C17orf77Q96MU5 243 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 SIGMAR1Q99720 223 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 CNFNQ9BYD5 112 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 MAP1LC3AQ9H492 121 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 SIGLEC8Q9NYZ4 499 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 MRPL36Q9P0J6 103 aaKnown RBP1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 LENEPQ9Y5L5 61 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM215AQ9Y5M1 114 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 BRCA2P51587 3418 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 POLEQ07864 2286 aa1.56□□□□□ -2.16
SNRNP40-207ENST00000491106 MKI67P46013 3256 aaKnown RBP1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 ABCA1O95477 2261 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 IGLV11-55A0A075B6I3 123 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A087WX48 190 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 TRAV8-1A0A0A6YYK1 113 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 TRBV7-1A0A0A6YYK4 115 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 TRAV12-1A0A0B4J245 112 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A1W2PPM0 123 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 E9PLD3 99 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 H3BRN7 92 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 H3BUT2 72 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 H7C1H1 209 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 K7EIM0 57 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 NDUFS8O00217 210 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 NBR2O15453 112 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 SNAI2O43623 268 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 DPM2O94777 84 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 NDUFA3O95167 84 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 BRI3O95415 125 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 IGKCP01834 107 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 ARMS2P0C7Q2 107 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 IGLC6P0CF74 106 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 FGF6P10767 208 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 HLA-DRB4P13762 266 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 CD24P25063 80 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 LEPP41159 167 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 LYZP61626 148 aa1.55□□□□□ -2.16
SNRNP40-207ENST00000491106 PAX8Q06710 450 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms