RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 TMEM183AQ8IXX5 376 aa9.49□□□□□ -0.89
TRAIP-211ENST00000491060 SMLR1H3BR10 107 aa9.48□□□□□ -0.89
TRAIP-211ENST00000491060 CRISP2P16562 243 aa9.48□□□□□ -0.89
TRAIP-211ENST00000491060 CDC34P49427 236 aaPredicted RBP9.48□□□□□ -0.89
TRAIP-211ENST00000491060 LGALS9BQ3B8N2 356 aa9.48□□□□□ -0.89
TRAIP-211ENST00000491060 ZNF680Q8NEM1 530 aa9.48□□□□□ -0.89
TRAIP-211ENST00000491060 OTORQ9NRC9 128 aa9.48□□□□□ -0.89
TRAIP-211ENST00000491060 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
TRAIP-211ENST00000491060 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
TRAIP-211ENST00000491060 RPL7L1Q6DKI1 246 aaKnown RBP9.47□□□□□ -0.89
TRAIP-211ENST00000491060 Q6ZR54 194 aa9.47□□□□□ -0.89
TRAIP-211ENST00000491060 LINC00336Q6ZUF6 198 aa9.47□□□□□ -0.89
TRAIP-211ENST00000491060 LINC00612Q8N6U2 182 aa9.47□□□□□ -0.89
TRAIP-211ENST00000491060 ZNRF2Q8NHG8 242 aa9.47□□□□□ -0.89
TRAIP-211ENST00000491060 SFTA3P0C7M3 94 aa9.46□□□□□ -0.9
TRAIP-211ENST00000491060 TCL1AP56279 114 aa9.46□□□□□ -0.9
TRAIP-211ENST00000491060 ZNF415Q09FC8 603 aa9.46□□□□□ -0.9
TRAIP-211ENST00000491060 DAZ2Q13117 558 aaKnown RBP9.46□□□□□ -0.9
TRAIP-211ENST00000491060 ESRGQ1W209 222 aa9.46□□□□□ -0.9
TRAIP-211ENST00000491060 RXFP4Q8TDU9 374 aa9.46□□□□□ -0.9
TRAIP-211ENST00000491060 RAB24Q969Q5 203 aa9.46□□□□□ -0.9
TRAIP-211ENST00000491060 C8orf49Q96NF6 230 aa9.46□□□□□ -0.9
TRAIP-211ENST00000491060 MUC4Q99102 2169 aa9.46□□□□□ -0.9
TRAIP-211ENST00000491060 NBDYA0A0U1RRE5 68 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 GNRH2O43555 120 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 SPINK4O60575 86 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 GIPP09681 153 aaPredicted RBP9.45□□□□□ -0.9
TRAIP-211ENST00000491060 ZNF266Q14584 549 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 ANXA2RQ3ZCQ2 193 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 FAM74A1Q5RGS3 127 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 INO80EQ8NBZ0 244 aaPredicted RBP9.45□□□□□ -0.9
TRAIP-211ENST00000491060 OR2T35Q8NGX2 323 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 AQP10Q96PS8 301 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 FAT2Q9NYQ8 4349 aa9.45□□□□□ -0.9
TRAIP-211ENST00000491060 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 GCHFRP30047 84 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 FGF8P55075 233 aaPredicted RBP9.44□□□□□ -0.9
TRAIP-211ENST00000491060 UBE2G2P60604 165 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 FAM159AQ6UWV7 190 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 PQLC2Q6ZP29 291 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 LYPD1Q8N2G4 141 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 OR2G3Q8NGZ4 309 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 TVP23CQ96ET8 276 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 VSIG2Q96IQ7 327 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 TREM1Q9NP99 234 aa9.44□□□□□ -0.9
TRAIP-211ENST00000491060 RBAKDNA6NC62 111 aa9.43□□□□□ -0.9
TRAIP-211ENST00000491060 ARPC5O15511 151 aa9.43□□□□□ -0.9
TRAIP-211ENST00000491060 PAX4O43316 350 aa9.43□□□□□ -0.9
TRAIP-211ENST00000491060 TNP2Q05952 138 aa9.43□□□□□ -0.9
TRAIP-211ENST00000491060 RGS21Q2M5E4 152 aa9.43□□□□□ -0.9
TRAIP-211ENST00000491060 PRNTQ86SH4 94 aa9.43□□□□□ -0.9
TRAIP-211ENST00000491060 LINC00467Q9BRT7 94 aa9.43□□□□□ -0.9
TRAIP-211ENST00000491060 ACTR3CQ9C0K3 210 aaPredicted RBP9.43□□□□□ -0.9
TRAIP-211ENST00000491060 Q9H8V8 135 aa9.43□□□□□ -0.9
TRAIP-211ENST00000491060 BORCS7-ASMTA0A0B4J1R7 106 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 TRGV4A0A0C4DH28 118 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 IGHV3-16A0A0C4DH30 117 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 RNF222A6NCQ9 220 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 NMBP08949 121 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 SUMO1P63165 101 aaKnown RBP9.42□□□□□ -0.9
TRAIP-211ENST00000491060 TMEM75Q8N9X5 138 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 ZNF479Q96JC4 524 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 TNFSF18Q9UNG2 199 aa9.42□□□□□ -0.9
TRAIP-211ENST00000491060 TRGV11A0A075B6L2 103 aa9.41□□□□□ -0.9
TRAIP-211ENST00000491060 TRAV34A0A0B4J273 112 aa9.41□□□□□ -0.9
TRAIP-211ENST00000491060 C9JCJ5 164 aa9.41□□□□□ -0.9
TRAIP-211ENST00000491060 TYMSP04818 313 aa9.41□□□□□ -0.9
TRAIP-211ENST00000491060 IBA57Q5T440 356 aaKnown RBP9.41□□□□□ -0.9
TRAIP-211ENST00000491060 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
TRAIP-211ENST00000491060 ST6GAL2Q96JF0 529 aa9.41□□□□□ -0.9
TRAIP-211ENST00000491060 PSMG3Q9BT73 122 aaPredicted RBP9.41□□□□□ -0.9
TRAIP-211ENST00000491060 KRTAP1-5Q9BYS1 174 aa9.41□□□□□ -0.9
TRAIP-211ENST00000491060 IGHV3-73A0A0B4J1V6 119 aa9.4□□□□□ -0.9
TRAIP-211ENST00000491060 A0A1B0GV50 99 aa9.4□□□□□ -0.9
TRAIP-211ENST00000491060 TCRAP04437 139 aa9.4□□□□□ -0.9
TRAIP-211ENST00000491060 ZNF80P51504 273 aaPredicted RBP9.4□□□□□ -0.9
TRAIP-211ENST00000491060 ZNF726P1Q15940 193 aa9.4□□□□□ -0.9
TRAIP-211ENST00000491060 Q6AWC8 147 aa9.4□□□□□ -0.9
TRAIP-211ENST00000491060 LINC00479Q96M42 142 aa9.4□□□□□ -0.9
TRAIP-211ENST00000491060 NDFIP1Q9BT67 221 aa9.4□□□□□ -0.9
TRAIP-211ENST00000491060 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
TRAIP-211ENST00000491060 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 TRAV21A0A0B4J279 112 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 LOC100131303A0A0U1RQF7 123 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 GGTLC3B5MD39 225 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 CXorf1O96002 111 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 IFNA7P01567 189 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 MBP02144 154 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
TRAIP-211ENST00000491060 FHL2Q14192 279 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 AKR1C8PQ5T2L2 129 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 SDF2L1Q9HCN8 221 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 PSG8Q9UQ74 426 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 HHLA3Q9XRX5 114 aa9.39□□□□□ -0.91
TRAIP-211ENST00000491060 HERC2O95714 4834 aa9.38□□□□□ -0.91
TRAIP-211ENST00000491060 PKD1P98161 4303 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms