RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 A0A1W2PPB8 328 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 A0A1W2PRS3 328 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 KIR3DP1A8MWS1 328 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 CRYGSP22914 178 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 CAV3P56539 151 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 TMEM128Q5BJH2 165 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 C6orf52Q5T4I8 152 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 XAF1Q6GPH4 301 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 DEFB132Q7Z7B7 95 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 NAT14Q8WUY8 206 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 DDA1Q9BW61 102 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 PLAC8Q9NZF1 115 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 TRAPPC2LQ9UL33 140 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 TRPM7Q96QT4 1865 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 DSPPQ9NZW4 1301 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 FGD6Q6ZV73 1430 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 LOC107984156A0A0G2JMH3 177 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 LOC107984640A0A0U1RRK4 108 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 LOC107986453A0A1B0GWG9 222 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 ARL5CA6NH57 179 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 PGRMC1O00264 195 aaKnown RBP0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 KRTAP2-3P0C7H8 128 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 RPS3P23396 243 aaKnown RBP eCLIP0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 SPINK7P58062 85 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 BLCAPP62952 87 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 QRFPP83859 136 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 ARL17AQ8IVW1 177 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 AP1S3Q96PC3 154 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 FAM103A1Q9BTL3 118 aaKnown RBP0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 KRTAP2-4Q9BYR9 128 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 KRTAP2-1Q9BYU5 128 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 PBRM1Q86U86 1689 aa0.42□□□□□ -2.34
SEMA3A-207ENST00000490883 MEGF8Q7Z7M0 2845 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 ATG2AQ2TAZ0 1938 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 BBIP1A8MTZ0 92 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 NEFHP12036 1026 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 RPL22P35268 128 aaKnown RBP0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 SNRPD3P62318 126 aaKnown RBP0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 C3orf62Q6ZUJ4 267 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 OR51A4Q8NGJ6 313 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 CCDC115Q96NT0 180 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 TNCP24821 2201 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 A2MP01023 1474 aa0.41□□□□□ -2.34
SEMA3A-207ENST00000490883 IFITM5A6NNB3 132 aa0.4□□□□□ -2.35
SEMA3A-207ENST00000490883 LINC00208Q96KT6 92 aa0.4□□□□□ -2.35
SEMA3A-207ENST00000490883 MRPL35Q9NZE8 188 aaKnown RBP0.4□□□□□ -2.35
SEMA3A-207ENST00000490883 MYH1P12882 1939 aa0.4□□□□□ -2.35
SEMA3A-207ENST00000490883 PRORSD1PA6NEY8 169 aa0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 IGF2P01344 180 aa0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 HBDP02042 147 aa0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 EVI2AP22794 236 aa0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 GTF2A1P52655 376 aaPredicted RBP0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 GLYATL3Q5SZD4 288 aa0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 OR5A2Q8NGI9 324 aa0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 MRPL36Q9P0J6 103 aaKnown RBP0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 COMMD3Q9UBI1 195 aa0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 LOC285556D6RIA3 1793 aa0.39□□□□□ -2.35
SEMA3A-207ENST00000490883 NBDYA0A0U1RRE5 68 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 TMEM189A5PLL7 270 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 M0QZK8 103 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 KDELR1P24390 212 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 ETV6P41212 452 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 LSM3P62310 102 aaKnown RBP0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 RPS28P62857 69 aaKnown RBP0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 ASB16-AS1Q495Z4 193 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 SAMD13Q5VXD3 122 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 KCPQ6ZWJ8 1503 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
SEMA3A-207ENST00000490883 EDF1O60869 148 aaKnown RBP0.37□□□□□ -2.35
SEMA3A-207ENST00000490883 FXYD3Q14802 87 aa0.37□□□□□ -2.35
SEMA3A-207ENST00000490883 RHOHQ15669 191 aa0.37□□□□□ -2.35
SEMA3A-207ENST00000490883 TMEM35BQ8NCS4 154 aa0.37□□□□□ -2.35
SEMA3A-207ENST00000490883 BRK1Q8WUW1 75 aa0.37□□□□□ -2.35
SEMA3A-207ENST00000490883 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.37□□□□□ -2.35
SEMA3A-207ENST00000490883 SPAG17Q6Q759 2223 aa0.37□□□□□ -2.35
SEMA3A-207ENST00000490883 LOC101927531A0A1B0GV80 90 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 TMEM30CPA0ZSE6 113 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 HIGD1CA8MV81 97 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 UQCRQO14949 82 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 S100GP29377 79 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 SPINK13Q1W4C9 94 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 LYPD5Q6UWN5 251 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 SMIM15Q7Z3B0 74 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 C5orf56Q8N8D9 126 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 OR8J3Q8NGG0 315 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 SMIM7Q9BQ49 75 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 SELENOSQ9BQE4 189 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 BDP1A6H8Y1 2624 aa0.36□□□□□ -2.35
SEMA3A-207ENST00000490883 MED23Q9ULK4 1368 aa0.35□□□□□ -2.35
SEMA3A-207ENST00000490883 CDC42EP2O14613 210 aa0.35□□□□□ -2.35
SEMA3A-207ENST00000490883 LY6G6CO95867 125 aa0.35□□□□□ -2.35
SEMA3A-207ENST00000490883 SLC25A5P05141 298 aaKnown RBP0.35□□□□□ -2.35
SEMA3A-207ENST00000490883 NDUFAF1Q9Y375 327 aa0.35□□□□□ -2.35
SEMA3A-207ENST00000490883 XIRP1Q702N8 1843 aaKnown RBP0.35□□□□□ -2.35
SEMA3A-207ENST00000490883 ESPL1Q14674 2120 aa0.35□□□□□ -2.35
SEMA3A-207ENST00000490883 NBEAP1P0C6P0 100 aa0.34□□□□□ -2.36
SEMA3A-207ENST00000490883 CKS2P33552 79 aa0.34□□□□□ -2.36
SEMA3A-207ENST00000490883 RPL37P61927 97 aaKnown RBP0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms