RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 AQP10Q96PS8 301 aa21.84■■□□□ 1.09
LDB1-204ENST00000490751 ARPC5LQ9BPX5 153 aa21.84■■□□□ 1.09
LDB1-204ENST00000490751 SPINK4O60575 86 aa21.83■■□□□ 1.09
LDB1-204ENST00000490751 HSD17B11Q8NBQ5 300 aa21.83■■□□□ 1.09
LDB1-204ENST00000490751 C18orf15Q96N68 181 aa21.83■■□□□ 1.09
LDB1-204ENST00000490751 RPH3ALQ9UNE2 315 aa21.83■■□□□ 1.09
LDB1-204ENST00000490751 PGPA6NDG6 321 aa21.82■■□□□ 1.08
LDB1-204ENST00000490751 HMGB3O15347 200 aaKnown RBP21.82■■□□□ 1.08
LDB1-204ENST00000490751 C1orf134Q5TEV5 83 aa21.82■■□□□ 1.08
LDB1-204ENST00000490751 SSX7Q7RTT5 188 aa21.82■■□□□ 1.08
LDB1-204ENST00000490751 CMTM2Q8TAZ6 248 aa21.82■■□□□ 1.08
LDB1-204ENST00000490751 H3BNG1 76 aa21.81■■□□□ 1.08
LDB1-204ENST00000490751 Q5BKY6 102 aa21.81■■□□□ 1.08
LDB1-204ENST00000490751 FAM74A1Q5RGS3 127 aa21.81■■□□□ 1.08
LDB1-204ENST00000490751 LENEPQ9Y5L5 61 aa21.81■■□□□ 1.08
LDB1-204ENST00000490751 NBDYA0A0U1RRE5 68 aa21.8■■□□□ 1.08
LDB1-204ENST00000490751 GIPP09681 153 aaPredicted RBP21.8■■□□□ 1.08
LDB1-204ENST00000490751 MUC21Q5SSG8 566 aa21.8■■□□□ 1.08
LDB1-204ENST00000490751 OR2G3Q8NGZ4 309 aa21.8■■□□□ 1.08
LDB1-204ENST00000490751 CDC34P49427 236 aaPredicted RBP21.79■■□□□ 1.08
LDB1-204ENST00000490751 PSMG3Q9BT73 122 aaPredicted RBP21.79■■□□□ 1.08
LDB1-204ENST00000490751 MRPL16Q9NX20 251 aaKnown RBP21.79■■□□□ 1.08
LDB1-204ENST00000490751 ATP6V0CP27449 155 aa21.78■■□□□ 1.08
LDB1-204ENST00000490751 ZNF415Q09FC8 603 aa21.78■■□□□ 1.08
LDB1-204ENST00000490751 TMED6Q8WW62 240 aa21.78■■□□□ 1.08
LDB1-204ENST00000490751 PKD1P98161 4303 aa21.77■■□□□ 1.08
LDB1-204ENST00000490751 ARL14EPLP0DKL9 152 aa21.77■■□□□ 1.08
LDB1-204ENST00000490751 Q6AWC8 147 aa21.77■■□□□ 1.08
LDB1-204ENST00000490751 ASB13Q8WXK3 278 aa21.77■■□□□ 1.08
LDB1-204ENST00000490751 VSIG2Q96IQ7 327 aa21.77■■□□□ 1.08
LDB1-204ENST00000490751 MUC4Q99102 2169 aa21.77■■□□□ 1.07
LDB1-204ENST00000490751 GOLT1AQ6ZVE7 132 aa21.76■■□□□ 1.07
LDB1-204ENST00000490751 PKHD1P08F94 4074 aa21.76■■□□□ 1.07
LDB1-204ENST00000490751 STAG3L2P0CL84 134 aa21.75■■□□□ 1.07
LDB1-204ENST00000490751 STAG3L3P0CL85 134 aa21.75■■□□□ 1.07
LDB1-204ENST00000490751 ARL6IP6Q8N6S5 226 aa21.75■■□□□ 1.07
LDB1-204ENST00000490751 ST6GAL2Q96JF0 529 aa21.75■■□□□ 1.07
LDB1-204ENST00000490751 HERC2O95714 4834 aa21.75■■□□□ 1.07
LDB1-204ENST00000490751 ESRGQ1W209 222 aa21.74■■□□□ 1.07
LDB1-204ENST00000490751 IGHV3-53P01767 116 aa21.73■■□□□ 1.07
LDB1-204ENST00000490751 GNG5P63218 68 aa21.73■■□□□ 1.07
LDB1-204ENST00000490751 FAM159AQ6UWV7 190 aa21.73■■□□□ 1.07
LDB1-204ENST00000490751 INO80EQ8NBZ0 244 aaPredicted RBP21.73■■□□□ 1.07
LDB1-204ENST00000490751 RAB24Q969Q5 203 aa21.73■■□□□ 1.07
LDB1-204ENST00000490751 SH3BGRL3Q9H299 93 aa21.73■■□□□ 1.07
LDB1-204ENST00000490751 MDFICQ9P1T7 246 aa21.73■■□□□ 1.07
LDB1-204ENST00000490751 A0A096LPF7 62 aa21.72■■□□□ 1.07
LDB1-204ENST00000490751 SERF2P84101 59 aa21.72■■□□□ 1.07
LDB1-204ENST00000490751 Q9H8V8 135 aa21.72■■□□□ 1.07
LDB1-204ENST00000490751 DYNC1H1Q14204 4646 aaKnown RBP21.72■■□□□ 1.07
LDB1-204ENST00000490751 DNAH11Q96DT5 4516 aa21.71■■□□□ 1.07
LDB1-204ENST00000490751 FXYD6-FXYD2A0A087WZ82 144 aa21.71■■□□□ 1.07
LDB1-204ENST00000490751 TRAV8-1A0A0A6YYK1 113 aa21.71■■□□□ 1.07
LDB1-204ENST00000490751 RNF222A6NCQ9 220 aa21.71■■□□□ 1.07
LDB1-204ENST00000490751 MBP02144 154 aa21.71■■□□□ 1.07
LDB1-204ENST00000490751 TMEM183BQ1AE95 376 aa21.71■■□□□ 1.07
LDB1-204ENST00000490751 TMEM183AQ8IXX5 376 aa21.71■■□□□ 1.07
LDB1-204ENST00000490751 NAGKQ9UJ70 344 aa21.71■■□□□ 1.07
LDB1-204ENST00000490751 C6orf223Q8N319 242 aa21.7■■□□□ 1.06
LDB1-204ENST00000490751 KIAA1109Q2LD37 5005 aa21.69■■□□□ 1.06
LDB1-204ENST00000490751 TRGV11A0A075B6L2 103 aa21.69■■□□□ 1.06
LDB1-204ENST00000490751 F6UZH7 168 aa21.69■■□□□ 1.06
LDB1-204ENST00000490751 GCHFRP30047 84 aa21.69■■□□□ 1.06
LDB1-204ENST00000490751 TVP23CQ96ET8 276 aa21.69■■□□□ 1.06
LDB1-204ENST00000490751 UPK3BQ9BT76 320 aa21.69■■□□□ 1.06
LDB1-204ENST00000490751 TNFSF18Q9UNG2 199 aa21.69■■□□□ 1.06
LDB1-204ENST00000490751 MRPS16Q9Y3D3 137 aaKnown RBP21.69■■□□□ 1.06
LDB1-204ENST00000490751 RGS21Q2M5E4 152 aa21.68■■□□□ 1.06
LDB1-204ENST00000490751 RPL7L1Q6DKI1 246 aaKnown RBP21.68■■□□□ 1.06
LDB1-204ENST00000490751 OR2T35Q8NGX2 323 aa21.68■■□□□ 1.06
LDB1-204ENST00000490751 SUN5Q8TC36 379 aa21.68■■□□□ 1.06
LDB1-204ENST00000490751 TREM1Q9NP99 234 aa21.68■■□□□ 1.06
LDB1-204ENST00000490751 PAX4O43316 350 aa21.67■■□□□ 1.06
LDB1-204ENST00000490751 ACTR3CQ9C0K3 210 aaPredicted RBP21.67■■□□□ 1.06
LDB1-204ENST00000490751 TRAV21A0A0B4J279 112 aa21.66■■□□□ 1.06
LDB1-204ENST00000490751 TDRG1Q3Y452 100 aa21.66■■□□□ 1.06
LDB1-204ENST00000490751 C5orf17Q8NAS9 161 aa21.66■■□□□ 1.06
LDB1-204ENST00000490751 SGK494Q96LW2 274 aa21.66■■□□□ 1.06
LDB1-204ENST00000490751 SPXQ9BT56 116 aa21.66■■□□□ 1.06
LDB1-204ENST00000490751 PRO0255Q9UI72 69 aa21.66■■□□□ 1.06
LDB1-204ENST00000490751 BORCS7-ASMTA0A0B4J1R7 106 aa21.65■■□□□ 1.06
LDB1-204ENST00000490751 SERTM2A0A1B0GWG4 89 aa21.64■■□□□ 1.05
LDB1-204ENST00000490751 CXorf1O96002 111 aa21.64■■□□□ 1.05
LDB1-204ENST00000490751 TCRAP04437 139 aa21.64■■□□□ 1.05
LDB1-204ENST00000490751 TNP2Q05952 138 aa21.64■■□□□ 1.05
LDB1-204ENST00000490751 FHL2Q14192 279 aa21.64■■□□□ 1.05
LDB1-204ENST00000490751 TTC32Q5I0X7 151 aa21.64■■□□□ 1.05
LDB1-204ENST00000490751 TMEM167BQ9NRX6 74 aa21.64■■□□□ 1.05
LDB1-204ENST00000490751 ICOSQ9Y6W8 199 aa21.64■■□□□ 1.05
LDB1-204ENST00000490751 CRYBA4P53673 196 aa21.63■■□□□ 1.05
LDB1-204ENST00000490751 SLAQ13239 276 aa21.63■■□□□ 1.05
LDB1-204ENST00000490751 C8orf49Q96NF6 230 aa21.63■■□□□ 1.05
LDB1-204ENST00000490751 NDFIP1Q9BT67 221 aa21.63■■□□□ 1.05
LDB1-204ENST00000490751 KRTAP1-5Q9BYS1 174 aa21.63■■□□□ 1.05
LDB1-204ENST00000490751 HHLA3Q9XRX5 114 aa21.63■■□□□ 1.05
LDB1-204ENST00000490751 GNRH2O43555 120 aa21.62■■□□□ 1.05
LDB1-204ENST00000490751 RASL10AQ92737 203 aa21.62■■□□□ 1.05
LDB1-204ENST00000490751 GGTLC3B5MD39 225 aa21.61■■□□□ 1.05
LDB1-204ENST00000490751 G3V3Q6 166 aa21.61■■□□□ 1.05
LDB1-204ENST00000490751 SFTA3P0C7M3 94 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms