RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 TNFRSF14Q92956 283 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 ATP6V0BQ99437 205 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 Q9UFV3 132 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 H3BRN7 92 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 SIGLEC15Q6ZMC9 328 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 TECTAO75443 2155 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 LAMA1P25391 3075 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 NPC2P61916 151 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 ZNF672Q499Z4 452 aaPredicted RBP10.13□□□□□ -0.79
SHOX2-205ENST00000490689 SLC50A1Q9BRV3 221 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 NCOR1P1Q9H4R4 102 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 TMEM14CQ9P0S9 112 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 A0A0U1RRA0 63 aa10.12□□□□□ -0.79
SHOX2-205ENST00000490689 F8W1H4 67 aa10.12□□□□□ -0.79
SHOX2-205ENST00000490689 PRSS33Q8NF86 280 aa10.12□□□□□ -0.79
SHOX2-205ENST00000490689 PRSS22Q9GZN4 317 aa10.12□□□□□ -0.79
SHOX2-205ENST00000490689 CELSR3Q9NYQ7 3312 aa10.12□□□□□ -0.79
SHOX2-205ENST00000490689 IGKV3D-20A0A0C4DH25 116 aa10.12□□□□□ -0.79
SHOX2-205ENST00000490689 PDE6HQ13956 83 aa10.12□□□□□ -0.79
SHOX2-205ENST00000490689 C10orf142B7Z368 130 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 CD7P09564 240 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 TMEM219Q86XT9 240 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 MLST8Q9BVC4 326 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 FAM215AQ9Y5M1 114 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 CGB3P0DN86 165 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 CGB7P0DN87 165 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 ANXA2RQ3ZCQ2 193 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 DKK4Q9UBT3 224 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 OTOGLQ3ZCN5 2332 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 E7EQL1 145 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 WT1P19544 449 aaPredicted RBP10.11□□□□□ -0.79
SHOX2-205ENST00000490689 TEX36Q5VZQ5 186 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 URB1-AS1Q96HZ7 61 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 PRADC1Q9BSG0 188 aa10.11□□□□□ -0.79
SHOX2-205ENST00000490689 IGLL5B9A064 214 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 C9JAW5 83 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 SIVA1O15304 175 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 Q8N8P6 123 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 A0A087WWL8 130 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 K7EM74 188 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 CEACAM4O75871 244 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 ZFAND6Q6FIF0 208 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 C2orf66Q6UXQ4 117 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 DYNAPQ8N1N2 210 aa10.1□□□□□ -0.79
SHOX2-205ENST00000490689 DSCAMO60469 2012 aa10.09□□□□□ -0.79
SHOX2-205ENST00000490689 SETD2Q9BYW2 2564 aaPredicted RBP10.09□□□□□ -0.79
SHOX2-205ENST00000490689 IGF2RP11717 2491 aa10.09□□□□□ -0.79
SHOX2-205ENST00000490689 TRAV21A0A0B4J279 112 aa10.09□□□□□ -0.79
SHOX2-205ENST00000490689 ID1P41134 155 aa10.09□□□□□ -0.79
SHOX2-205ENST00000490689 NUP37Q8NFH4 326 aa10.09□□□□□ -0.79
SHOX2-205ENST00000490689 C2orf91Q6ZV80 131 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 ERG28Q9UKR5 140 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 TET2Q6N021 2002 aaPredicted RBP10.08□□□□□ -0.8
SHOX2-205ENST00000490689 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 G3V318 75 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 IGLV2-23P01705 113 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 CR1LQ2VPA4 569 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 Q71RC1 249 aaPredicted RBP10.08□□□□□ -0.8
SHOX2-205ENST00000490689 VMO1Q7Z5L0 202 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 LINC00311Q8N616 119 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 K7EIM0 57 aa10.08□□□□□ -0.8
SHOX2-205ENST00000490689 CRXO43186 299 aaPredicted RBP10.07□□□□□ -0.8
SHOX2-205ENST00000490689 I3L2K1 104 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
SHOX2-205ENST00000490689 FOXI2Q6ZQN5 318 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 CUL9Q8IWT3 2517 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 IGKV2D-26A0A0A0MRZ7 120 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 F8VRH5 84 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 CFHR4Q92496 578 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 VCX2Q9H322 139 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 SZT2Q5T011 3432 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 RUSC1-AS1Q66K80 236 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 MRAP2Q96G30 205 aa10.07□□□□□ -0.8
SHOX2-205ENST00000490689 IGHV3OR16-12A0A075B7B8 117 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 TSPAN13O95857 204 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 PAX8Q06710 450 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 FOXE3Q13461 319 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 RRN3P1Q2M238 152 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 TMEM95Q3KNT9 176 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 LINC01559Q495D7 138 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 C22orf34Q6ZV56 151 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 KLHL30-AS1Q8NEE0 82 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 PPP1R17O96001 155 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 PRAC2D3DTV9 90 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 SEM1Q6ZVN7 128 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 PTH2Q96A98 100 aa10.06□□□□□ -0.8
SHOX2-205ENST00000490689 NBEAQ8NFP9 2946 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 RNF5Q99942 180 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 EXPH5Q8NEV8 1989 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 ODF1Q14990 250 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 AGPAT4-IT1Q9H0P7 198 aa10.05□□□□□ -0.8
SHOX2-205ENST00000490689 TRANK1O15050 2925 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms