RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 KHDC3LQ587J8 217 aa11.21□□□□□ -0.61
SNAP29-203ENST00000490458 FAM122CQ6P4D5 195 aa11.21□□□□□ -0.61
SNAP29-203ENST00000490458 LCN15Q6UWW0 184 aa11.21□□□□□ -0.61
SNAP29-203ENST00000490458 C9orf62Q8N4C0 152 aa11.21□□□□□ -0.61
SNAP29-203ENST00000490458 FRZBQ92765 325 aa11.21□□□□□ -0.61
SNAP29-203ENST00000490458 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
SNAP29-203ENST00000490458 C20orf144Q9BQM9 153 aa11.21□□□□□ -0.61
SNAP29-203ENST00000490458 SLC25A2Q9BXI2 301 aa11.21□□□□□ -0.61
SNAP29-203ENST00000490458 FAT1Q14517 4588 aa11.21□□□□□ -0.62
SNAP29-203ENST00000490458 A0A096LPF7 62 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 OR7C2O60412 319 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 SEC11BP0C7V7 166 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 IGLC2P0DOY2 106 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 HIST1H1EP10412 219 aaKnown RBP11.2□□□□□ -0.62
SNAP29-203ENST00000490458 CDC34P49427 236 aaPredicted RBP11.2□□□□□ -0.62
SNAP29-203ENST00000490458 EIF5AL1Q6IS14 154 aaKnown RBP11.2□□□□□ -0.62
SNAP29-203ENST00000490458 SLC51BQ86UW2 128 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 CCDC28AQ8IWP9 274 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 STOML3Q8TAV4 291 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 FAM167A-AS1Q96KT0 104 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 PAXXQ9BUH6 204 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 ACTR3CQ9C0K3 210 aaPredicted RBP11.2□□□□□ -0.62
SNAP29-203ENST00000490458 OR51M1Q9H341 326 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 TMPRSS5Q9H3S3 457 aa11.2□□□□□ -0.62
SNAP29-203ENST00000490458 SNURFLB1AK76 121 aa11.19□□□□□ -0.62
SNAP29-203ENST00000490458 ERVFC1-1P60608 527 aa11.19□□□□□ -0.62
SNAP29-203ENST00000490458 GFI1BQ5VTD9 330 aa11.19□□□□□ -0.62
SNAP29-203ENST00000490458 CDPF1Q6NVV7 123 aa11.19□□□□□ -0.62
SNAP29-203ENST00000490458 PQLC2Q6ZP29 291 aa11.19□□□□□ -0.62
SNAP29-203ENST00000490458 VSIG2Q96IQ7 327 aa11.19□□□□□ -0.62
SNAP29-203ENST00000490458 SLC50A1Q9BRV3 221 aa11.19□□□□□ -0.62
SNAP29-203ENST00000490458 UMAD1C9J7I0 102 aa11.18□□□□□ -0.62
SNAP29-203ENST00000490458 H3BQ15 152 aa11.18□□□□□ -0.62
SNAP29-203ENST00000490458 ZNF253O75346 499 aa11.18□□□□□ -0.62
SNAP29-203ENST00000490458 SNRPCP09234 159 aaKnown RBP11.18□□□□□ -0.62
SNAP29-203ENST00000490458 NBEAP1P0C6P0 100 aa11.18□□□□□ -0.62
SNAP29-203ENST00000490458 PYYP10082 97 aa11.18□□□□□ -0.62
SNAP29-203ENST00000490458 RAB24Q969Q5 203 aa11.18□□□□□ -0.62
SNAP29-203ENST00000490458 TRBV19A0A075B6N1 114 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 H3BTX0 84 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 EREGO14944 169 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 SIVA1O15304 175 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 NKX2-5P52952 324 aaPredicted RBP11.17□□□□□ -0.62
SNAP29-203ENST00000490458 KRTAP10-1P60331 282 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 UBE2L3P68036 154 aaKnown RBP11.17□□□□□ -0.62
SNAP29-203ENST00000490458 PDE6HQ13956 83 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 Q6ZTI0 123 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 BLNKQ8WV28 456 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 TMED6Q8WW62 240 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 ZNF331Q9NQX6 463 aaPredicted RBP11.17□□□□□ -0.62
SNAP29-203ENST00000490458 TNFRSF18Q9Y5U5 241 aa11.17□□□□□ -0.62
SNAP29-203ENST00000490458 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
SNAP29-203ENST00000490458 CTXND1A0A1B0GTU2 59 aa11.16□□□□□ -0.62
SNAP29-203ENST00000490458 OR10J4P0C629 311 aa11.16□□□□□ -0.62
SNAP29-203ENST00000490458 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
SNAP29-203ENST00000490458 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
SNAP29-203ENST00000490458 DNAH10OSP0CZ25 163 aa11.16□□□□□ -0.62
SNAP29-203ENST00000490458 FXYD5Q96DB9 178 aa11.16□□□□□ -0.62
SNAP29-203ENST00000490458 SAT2Q96F10 170 aaPredicted RBP11.16□□□□□ -0.62
SNAP29-203ENST00000490458 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
SNAP29-203ENST00000490458 J3KRW8 73 aa11.15□□□□□ -0.62
SNAP29-203ENST00000490458 HMGB3O15347 200 aaKnown RBP11.15□□□□□ -0.62
SNAP29-203ENST00000490458 EIF3GO75821 320 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNAP29-203ENST00000490458 AAMDCQ9H7C9 122 aa11.15□□□□□ -0.62
SNAP29-203ENST00000490458 MDFICQ9P1T7 246 aa11.15□□□□□ -0.62
SNAP29-203ENST00000490458 VPS13BQ7Z7G8 4022 aa11.14□□□□□ -0.63
SNAP29-203ENST00000490458 SLC17A3O00476 420 aa11.14□□□□□ -0.63
SNAP29-203ENST00000490458 NXPH4O95158 308 aa11.14□□□□□ -0.63
SNAP29-203ENST00000490458 CXorf1O96002 111 aa11.14□□□□□ -0.63
SNAP29-203ENST00000490458 ARL14EPLP0DKL9 152 aa11.14□□□□□ -0.63
SNAP29-203ENST00000490458 DAZ2Q13117 558 aaKnown RBP11.14□□□□□ -0.63
SNAP29-203ENST00000490458 DPPA3Q6W0C5 159 aa11.14□□□□□ -0.63
SNAP29-203ENST00000490458 C18orf15Q96N68 181 aa11.14□□□□□ -0.63
SNAP29-203ENST00000490458 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
SNAP29-203ENST00000490458 A0A087WTM6 91 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 TRAV12-3A0A0B4J271 114 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 NDUFB4O95168 129 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 SMR3BP02814 79 aaPredicted RBP11.13□□□□□ -0.63
SNAP29-203ENST00000490458 GCHFRP30047 84 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 RAB5CP51148 216 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 ICAM4Q14773 271 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 FAM213BQ8TBF2 198 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 PYGO2Q9BRQ0 406 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 TMEM167BQ9NRX6 74 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
SNAP29-203ENST00000490458 TRGV2A0A075B6R0 118 aa11.12□□□□□ -0.63
SNAP29-203ENST00000490458 MAP1LC3B2A6NCE7 125 aa11.12□□□□□ -0.63
SNAP29-203ENST00000490458 ZNF726P1Q15940 193 aa11.12□□□□□ -0.63
SNAP29-203ENST00000490458 IQCF2Q8IXL9 164 aa11.12□□□□□ -0.63
SNAP29-203ENST00000490458 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
SNAP29-203ENST00000490458 MAP1LC3BQ9GZQ8 125 aa11.12□□□□□ -0.63
SNAP29-203ENST00000490458 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
SNAP29-203ENST00000490458 CT45A10P0DMU9 189 aa11.11□□□□□ -0.63
SNAP29-203ENST00000490458 LEPP41159 167 aa11.11□□□□□ -0.63
SNAP29-203ENST00000490458 FHITP49789 147 aa11.11□□□□□ -0.63
SNAP29-203ENST00000490458 RANP62826 216 aaKnown RBP11.11□□□□□ -0.63
SNAP29-203ENST00000490458 NFE4Q86UQ8 179 aa11.11□□□□□ -0.63
SNAP29-203ENST00000490458 PHYHIPLQ96FC7 376 aa11.11□□□□□ -0.63
SNAP29-203ENST00000490458 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
SNAP29-203ENST00000490458 GSN-AS1Q9NRJ2 163 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms