RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 H7BYZ3 331 aa9.05□□□□□ -0.96
HDAC1-210ENST00000490081 AKR1C3P42330 323 aa9.05□□□□□ -0.96
HDAC1-210ENST00000490081 GFI1BQ5VTD9 330 aa9.05□□□□□ -0.96
HDAC1-210ENST00000490081 MLST8Q9BVC4 326 aa9.05□□□□□ -0.96
HDAC1-210ENST00000490081 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
HDAC1-210ENST00000490081 MED9Q9NWA0 146 aa9.05□□□□□ -0.96
HDAC1-210ENST00000490081 RPH3ALQ9UNE2 315 aa9.05□□□□□ -0.96
HDAC1-210ENST00000490081 MIFP14174 115 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 FXYD7P58549 80 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 UBE2G1P62253 170 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 Q86TA4 180 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 TMEM183AQ8IXX5 376 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 Q8TAT8 98 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 EIF5A2Q9GZV4 153 aaKnown RBP9.04□□□□□ -0.96
HDAC1-210ENST00000490081 X6R8D5 127 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
HDAC1-210ENST00000490081 HUWE1Q7Z6Z7 4374 aaKnown RBP9.03□□□□□ -0.96
HDAC1-210ENST00000490081 TRAV12-2A0A075B6T6 113 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 TRAV34A0A0B4J273 112 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 RAB19A4D1S5 217 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 PRB4P10163 310 aaPredicted RBP9.03□□□□□ -0.96
HDAC1-210ENST00000490081 RPL35P42766 123 aaKnown RBP9.03□□□□□ -0.96
HDAC1-210ENST00000490081 KIR3DS1Q14943 382 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 PEA15Q15121 130 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 SMUG1Q53HV7 270 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 TOR2AQ5JU69 321 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 PRNTQ86SH4 94 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 NIPSNAP3BQ9BS92 247 aa9.03□□□□□ -0.96
HDAC1-210ENST00000490081 TRAV21A0A0B4J279 112 aa9.02□□□□□ -0.97
HDAC1-210ENST00000490081 RBMY1A1P0DJD3 496 aaKnown RBP9.02□□□□□ -0.97
HDAC1-210ENST00000490081 RBMY1CP0DJD4 496 aa9.02□□□□□ -0.97
HDAC1-210ENST00000490081 RNASE4P34096 147 aaKnown RBP9.02□□□□□ -0.97
HDAC1-210ENST00000490081 RBMY1FQ15415 496 aaKnown RBP9.02□□□□□ -0.97
HDAC1-210ENST00000490081 TDRG1Q3Y452 100 aa9.02□□□□□ -0.97
HDAC1-210ENST00000490081 ANXA2RQ3ZCQ2 193 aa9.02□□□□□ -0.97
HDAC1-210ENST00000490081 ZNF493Q6ZR52 646 aa9.02□□□□□ -0.97
HDAC1-210ENST00000490081 PCNPQ8WW12 178 aaKnown RBP9.02□□□□□ -0.97
HDAC1-210ENST00000490081 SGK494Q96LW2 274 aa9.02□□□□□ -0.97
HDAC1-210ENST00000490081 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
HDAC1-210ENST00000490081 TP53TG3Q9ULZ0 132 aa9.02□□□□□ -0.97
HDAC1-210ENST00000490081 U3KQK5 164 aa9.02□□□□□ -0.97
HDAC1-210ENST00000490081 TRAV12-3A0A0B4J271 114 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 TMEM189A5PLL7 270 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 FABP5P3A8MUU1 101 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 C9JCJ5 164 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 PFN1P07737 140 aaKnown RBP9.01□□□□□ -0.97
HDAC1-210ENST00000490081 SRP19P09132 144 aaKnown RBP9.01□□□□□ -0.97
HDAC1-210ENST00000490081 BTN1A1Q13410 526 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 PRR9Q5T870 116 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 BAGE2Q86Y30 109 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 Q8NAQ8 132 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 LINC01587Q99440 93 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 LY96Q9Y6Y9 160 aa9.01□□□□□ -0.97
HDAC1-210ENST00000490081 RRN3P1Q2M238 152 aa9□□□□□ -0.97
HDAC1-210ENST00000490081 ZNF674Q2M3X9 581 aa9□□□□□ -0.97
HDAC1-210ENST00000490081 FAM74A3Q4VXF1 159 aa9□□□□□ -0.97
HDAC1-210ENST00000490081 EIF4E3Q8N5X7 224 aaKnown RBP9□□□□□ -0.97
HDAC1-210ENST00000490081 C8orf49Q96NF6 230 aa9□□□□□ -0.97
HDAC1-210ENST00000490081 TMEM208Q9BTX3 173 aa9□□□□□ -0.97
HDAC1-210ENST00000490081 DERL1Q9BUN8 251 aa9□□□□□ -0.97
HDAC1-210ENST00000490081 BIN3Q9NQY0 253 aa9□□□□□ -0.97
HDAC1-210ENST00000490081 STAB2Q8WWQ8 2551 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 TRBV20OR9-2A0A075B6H5 130 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 IGHV1OR15-1A0A075B7D0 117 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 GCGP01275 180 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 IGLV2-8P01709 118 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 GNG4P50150 75 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 CRIP1P50238 77 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 ZNF80P51504 273 aaPredicted RBP8.99□□□□□ -0.97
HDAC1-210ENST00000490081 ZC2HC1AQ96GY0 325 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 KCNS1Q96KK3 526 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 PARLQ9H300 379 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 RETNQ9HD89 108 aa8.99□□□□□ -0.97
HDAC1-210ENST00000490081 LINC00862A6NCI5 91 aa8.98□□□□□ -0.97
HDAC1-210ENST00000490081 DNLZQ5SXM8 178 aa8.98□□□□□ -0.97
HDAC1-210ENST00000490081 IBA57Q5T440 356 aaKnown RBP8.98□□□□□ -0.97
HDAC1-210ENST00000490081 FAM162BQ5T6X4 162 aa8.98□□□□□ -0.97
HDAC1-210ENST00000490081 UQCC3Q6UW78 93 aa8.98□□□□□ -0.97
HDAC1-210ENST00000490081 RNASE8Q8TDE3 154 aaKnown RBP8.98□□□□□ -0.97
HDAC1-210ENST00000490081 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
HDAC1-210ENST00000490081 C16orf74Q96GX8 76 aa8.98□□□□□ -0.97
HDAC1-210ENST00000490081 EDA2RQ9HAV5 297 aa8.98□□□□□ -0.97
HDAC1-210ENST00000490081 KMT2CQ8NEZ4 4911 aaKnown RBP8.97□□□□□ -0.97
HDAC1-210ENST00000490081 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
HDAC1-210ENST00000490081 C9JQL5 133 aa8.97□□□□□ -0.97
HDAC1-210ENST00000490081 J3KRW8 73 aa8.97□□□□□ -0.97
HDAC1-210ENST00000490081 SRSF3P84103 164 aaKnown RBP8.97□□□□□ -0.97
HDAC1-210ENST00000490081 CENPWQ5EE01 88 aa8.97□□□□□ -0.97
HDAC1-210ENST00000490081 FAM159AQ6UWV7 190 aa8.97□□□□□ -0.97
HDAC1-210ENST00000490081 IGHV3OR16-12A0A075B7B8 117 aa8.96□□□□□ -0.98
HDAC1-210ENST00000490081 TEX48A0A1B0GUV7 120 aa8.96□□□□□ -0.98
HDAC1-210ENST00000490081 PLAC8L1A1L4L8 177 aa8.96□□□□□ -0.98
HDAC1-210ENST00000490081 ZNF705GA8MUZ8 300 aaPredicted RBP8.96□□□□□ -0.98
HDAC1-210ENST00000490081 AZU1P20160 251 aa8.96□□□□□ -0.98
HDAC1-210ENST00000490081 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
HDAC1-210ENST00000490081 Q6ZQT7 251 aa8.96□□□□□ -0.98
HDAC1-210ENST00000490081 SMIM7Q9BQ49 75 aa8.96□□□□□ -0.98
HDAC1-210ENST00000490081 TRGV11A0A075B6L2 103 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms