RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 IBA57-AS1B1ANH7 110 aa9.31□□□□□ -0.92
VARS-227ENST00000489979 C9JCJ5 164 aa9.31□□□□□ -0.92
VARS-227ENST00000489979 MUC21Q5SSG8 566 aa9.31□□□□□ -0.92
VARS-227ENST00000489979 FAM122CQ6P4D5 195 aa9.31□□□□□ -0.92
VARS-227ENST00000489979 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
VARS-227ENST00000489979 Q9HAA7 133 aa9.31□□□□□ -0.92
VARS-227ENST00000489979 SLC39A9Q9NUM3 307 aa9.31□□□□□ -0.92
VARS-227ENST00000489979 WDR83OSQ9Y284 106 aa9.31□□□□□ -0.92
VARS-227ENST00000489979 LOC100131303A0A0U1RQF7 123 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 L7N2F9 121 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 CST7O76096 145 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 NDUFB6O95139 128 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 RPL29P47914 159 aaKnown RBP9.3□□□□□ -0.92
VARS-227ENST00000489979 BCAP31P51572 246 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 VAMP2P63027 116 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 LINC01556Q5JQF7 62 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 RASL10AQ92737 203 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 UQCC1Q9NVA1 299 aa9.3□□□□□ -0.92
VARS-227ENST00000489979 CENPXA8MT69 81 aa9.29□□□□□ -0.92
VARS-227ENST00000489979 Q6ZSA8 131 aa9.29□□□□□ -0.92
VARS-227ENST00000489979 Q8TAT8 98 aa9.29□□□□□ -0.92
VARS-227ENST00000489979 SPXQ9BT56 116 aa9.29□□□□□ -0.92
VARS-227ENST00000489979 SLC25A31Q9H0C2 315 aa9.29□□□□□ -0.92
VARS-227ENST00000489979 C20orf85Q9H1P6 137 aa9.29□□□□□ -0.92
VARS-227ENST00000489979 TRAV4A0A0B4J268 109 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 UBE2L5PA0A1B0GUS4 154 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 FAM24AA6NFZ4 105 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 PPT1P50897 306 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 CAV2P51636 162 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 ZNF138P52744 262 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 TIRAPP58753 221 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 BAXQ07812 192 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 TMEM183BQ1AE95 376 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 LINC00299Q6ZSB3 139 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 SH2D6Q7Z4S9 175 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 TMEM183AQ8IXX5 376 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 NHLRC2Q8NBF2 726 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 S100ZQ8WXG8 99 aa9.28□□□□□ -0.92
VARS-227ENST00000489979 LSM5Q9Y4Y9 91 aaKnown RBP9.28□□□□□ -0.92
VARS-227ENST00000489979 NAP1L6A6NFF2 107 aa9.27□□□□□ -0.93
VARS-227ENST00000489979 A6NHS1 94 aa9.27□□□□□ -0.93
VARS-227ENST00000489979 CCSO14618 274 aa9.27□□□□□ -0.93
VARS-227ENST00000489979 WFDC2Q14508 124 aa9.27□□□□□ -0.93
VARS-227ENST00000489979 VWC2Q2TAL6 325 aa9.27□□□□□ -0.93
VARS-227ENST00000489979 GCSAMLQ5JQS6 135 aa9.27□□□□□ -0.93
VARS-227ENST00000489979 OR4C5Q8NGB2 326 aa9.27□□□□□ -0.93
VARS-227ENST00000489979 SLC25A2Q9BXI2 301 aa9.27□□□□□ -0.93
VARS-227ENST00000489979 GPN1Q9HCN4 374 aaPredicted RBP9.27□□□□□ -0.93
VARS-227ENST00000489979 TRAV8-6A0A0B4J262 113 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 IGHV3-30P01768 117 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 IGHV3-33P01772 117 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 IGHV3-30-3P0DP02 117 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 IGHV3-30-5P0DP03 117 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 ZNF266Q14584 549 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 CNPY1Q3B7I2 92 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 OR10J3Q5JRS4 329 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 MITD1Q8WV92 249 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 PKHD1L1Q86WI1 4243 aa9.26□□□□□ -0.93
VARS-227ENST00000489979 TRGV11A0A075B6L2 103 aa9.25□□□□□ -0.93
VARS-227ENST00000489979 IGHV3-16A0A0C4DH30 117 aa9.25□□□□□ -0.93
VARS-227ENST00000489979 NBEAP1P0C6P0 100 aa9.25□□□□□ -0.93
VARS-227ENST00000489979 FGF7P21781 194 aa9.25□□□□□ -0.93
VARS-227ENST00000489979 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
VARS-227ENST00000489979 CHAC2Q8WUX2 184 aa9.25□□□□□ -0.93
VARS-227ENST00000489979 FAM167A-AS1Q96KT0 104 aa9.25□□□□□ -0.93
VARS-227ENST00000489979 C11orf1Q9H5F2 150 aa9.25□□□□□ -0.93
VARS-227ENST00000489979 FAM25EA8MYX2 175 aa9.24□□□□□ -0.93
VARS-227ENST00000489979 GATA1P15976 413 aaPredicted RBP9.24□□□□□ -0.93
VARS-227ENST00000489979 S100A11P31949 105 aa9.24□□□□□ -0.93
VARS-227ENST00000489979 ZNF846Q147U1 533 aa9.24□□□□□ -0.93
VARS-227ENST00000489979 Q6AWC8 147 aa9.24□□□□□ -0.93
VARS-227ENST00000489979 MIR17HGQ75NE6 70 aa9.24□□□□□ -0.93
VARS-227ENST00000489979 CCDC32Q9BV29 185 aa9.24□□□□□ -0.93
VARS-227ENST00000489979 TM2D2Q9BX73 214 aa9.24□□□□□ -0.93
VARS-227ENST00000489979 NAGKQ9UJ70 344 aa9.24□□□□□ -0.93
VARS-227ENST00000489979 IGSF23A1L1A6 192 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 M0R2P5 195 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 LECT2O14960 151 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 OXTP01178 125 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 PFN1P07737 140 aaKnown RBP9.23□□□□□ -0.93
VARS-227ENST00000489979 BTCP35070 178 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 SULT1A1P50225 295 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 BAK1Q16611 211 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 SCXQ7RTU7 201 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 PHYHIPLQ96FC7 376 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 OR51M1Q9H341 326 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
VARS-227ENST00000489979 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.22□□□□□ -0.93
VARS-227ENST00000489979 GNRH2O43555 120 aa9.22□□□□□ -0.93
VARS-227ENST00000489979 OR10J4P0C629 311 aa9.22□□□□□ -0.93
VARS-227ENST00000489979 IL7P13232 177 aa9.22□□□□□ -0.93
VARS-227ENST00000489979 CSN1S1P47710 185 aa9.22□□□□□ -0.93
VARS-227ENST00000489979 KRTAP10-4P60372 401 aaPredicted RBP9.22□□□□□ -0.93
VARS-227ENST00000489979 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
VARS-227ENST00000489979 TMEM252Q8N6L7 170 aa9.22□□□□□ -0.93
VARS-227ENST00000489979 FXYD5Q96DB9 178 aa9.22□□□□□ -0.93
VARS-227ENST00000489979 PAXXQ9BUH6 204 aa9.22□□□□□ -0.93
VARS-227ENST00000489979 NPCDR1Q9BY65 106 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms