RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 LINC00526Q96FQ7 95 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 RPP25Q9BUL9 199 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 PLA2G2FQ9BZM2 168 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 ZNF71Q9NQZ8 489 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 ONECUT1Q9UBC0 465 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 RIF1Q5UIP0 2472 aaKnown RBP3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 SMKR1H3BMG3 65 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 NDUFA3O95167 84 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 PLAUP00749 431 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 ATP5G1P05496 136 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 IGHV4-34P06331 123 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 CECR9P0C854 216 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 P0DMU3 169 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 FAM231AP0DMU4 169 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 FAM231CP0DMU5 169 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 CCL3P10147 92 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 EMP1P54849 157 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 EBI3Q14213 229 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 C9orf153Q5TBE3 101 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 DGAT2L7PQ6IED9 249 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 SFTA2Q6UW10 78 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 GVINP1Q7Z2Y8 2422 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 LYPD1Q8N2G4 141 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 C10orf126Q8N4M7 172 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 NTN5Q8WTR8 489 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 NDUFA4L2Q9NRX3 87 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 PRO1854Q9UHT4 67 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 CHD6Q8TD26 2715 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 NCOR2Q9Y618 2525 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 A0A1W2PRX2 142 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 F8VRH5 84 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 WNT9BO14905 357 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 IGHV3-9P01782 118 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 IGLC6P0CF74 106 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 CFC1BP0CG36 223 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 CFC1P0CG37 223 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 LAGE3Q14657 143 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 DEFB121Q5J5C9 76 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 TEX36Q5VZQ5 186 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 C3orf56Q8N813 242 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 RNF185Q96GF1 192 aa3.71□□□□□ -1.82
SNRNP40-206ENST00000489853 FER1L5A0AVI2 2057 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 IGLV2-18A0A075B6J9 118 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 IGHV1OR21-1A0A087WYE8 117 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 TRBV10-2A0A0K0K1G8 114 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 IQCF6A8MYZ5 107 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 OOSP1A8MZH6 123 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 F5H768 121 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 DUX1O43812 170 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 SSR4P51571 173 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 CFHR1Q03591 330 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 ATXN8Q156A1 80 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 ZNF56Q15929 161 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 TMEM155Q4W5P6 130 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 SCGB1D4Q6XE38 83 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 COX8CQ7Z4L0 72 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 POM121L12Q8N7R1 296 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 DUX5Q96PT3 197 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 PTPRZ1P23471 2315 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 ASPMQ8IZT6 3477 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 TNCP24821 2201 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 IGHV1-45A0A0A0MS14 117 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 ZNF815PA8K554 130 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 F8WDY8 70 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 H3BMM0 161 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 H3BTX0 84 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 K7EM74 188 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 SAA2P0DJI9 122 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 CGB3P0DN86 165 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 CGB7P0DN87 165 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 PRDX2P32119 198 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 UCNP55089 124 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 LINC01620Q4KN68 170 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 ZNF474Q6S9Z5 364 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 EXOC3-AS1Q8N2X6 119 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 CD177Q8N6Q3 437 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 UBE2WQ96B02 151 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 PRR25Q96S07 402 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 CXXC4Q9H2H0 198 aa3.7□□□□□ -1.82
SNRNP40-206ENST00000489853 TRBV19A0A075B6N1 114 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 TEX49A0A1B0GTD5 131 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 LMO7DNF2Z398 122 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 IGHV3-30P01768 117 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 ACYP1P07311 99 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 SAA1P0DJI8 122 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 IGHV3-30-5P0DP03 117 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 COX6B1P14854 86 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 SLC25A16P16260 332 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 CRIP2P52943 208 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 MRPS21P82921 87 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 HOXA4Q00056 320 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 EDDM3AQ14507 147 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 TMEM170BQ5T4T1 132 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 GAGE2AQ6NT46 116 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 ZNF826PQ6ZT77 177 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 Q71RC1 249 aaPredicted RBP3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 TRPT1Q86TN4 253 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 CNFNQ9BYD5 112 aa3.69□□□□□ -1.82
SNRNP40-206ENST00000489853 TRGV11A0A075B6L2 103 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms