RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 LY6EQ16553 131 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 MRPL51Q4U2R6 128 aaKnown RBP11.45□□□□□ -0.58
COL9A1-208ENST00000489611 IL17RELQ6ZVW7 336 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 AMN1Q8IY45 258 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 MAPK1IP1LQ8NDC0 245 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 IGHV3-66A0A0C4DH42 116 aa11.44□□□□□ -0.58
COL9A1-208ENST00000489611 RPLP1P05386 114 aaKnown RBP11.44□□□□□ -0.58
COL9A1-208ENST00000489611 CSN3P07498 182 aa11.44□□□□□ -0.58
COL9A1-208ENST00000489611 CKS2P33552 79 aa11.44□□□□□ -0.58
COL9A1-208ENST00000489611 HNRNPA3P51991 378 aaKnown RBP11.44□□□□□ -0.58
COL9A1-208ENST00000489611 Q6ZN92 141 aa11.44□□□□□ -0.58
COL9A1-208ENST00000489611 A0A096LNT2 108 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 K7EMT4 169 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 PF4V1P10720 104 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 MS4A6AQ9H2W1 248 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 LINC00527Q9UJ94 153 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 ZNF207O43670 478 aaKnown RBP11.43□□□□□ -0.58
COL9A1-208ENST00000489611 CFHR3Q02985 330 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 Q5PR19 223 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 ZNF575Q86XF7 245 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 OR4X2Q8NGF9 303 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 OR10J6PQ8NGY7 276 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 ZNF747Q9BV97 191 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 SIGLEC8Q9NYZ4 499 aa11.43□□□□□ -0.58
COL9A1-208ENST00000489611 CENPEQ02224 2701 aa11.42□□□□□ -0.58
COL9A1-208ENST00000489611 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
COL9A1-208ENST00000489611 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
COL9A1-208ENST00000489611 TCF21O43680 179 aa11.42□□□□□ -0.58
COL9A1-208ENST00000489611 CACNG7P62955 275 aa11.42□□□□□ -0.58
COL9A1-208ENST00000489611 COL5A1-AS1Q5SY13 56 aa11.42□□□□□ -0.58
COL9A1-208ENST00000489611 LINC01545Q5VT33 79 aa11.42□□□□□ -0.58
COL9A1-208ENST00000489611 LRRC75A-AS1Q8N1F1 130 aa11.42□□□□□ -0.58
COL9A1-208ENST00000489611 DAZ1Q9NQZ3 744 aaKnown RBP11.42□□□□□ -0.58
COL9A1-208ENST00000489611 ABCA12Q86UK0 2595 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 IGHV4-4A0A075B6R2 117 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 IGLL1P15814 213 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 IFI27P40305 119 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-208ENST00000489611 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 NXT2Q9NPJ8 142 aaKnown RBP11.41□□□□□ -0.58
COL9A1-208ENST00000489611 IGHV3-49A0A0A0MS15 119 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 LINC01546A6NGU7 62 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 PRB4P10163 310 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-208ENST00000489611 TSPOP30536 169 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 BLCAPP62952 87 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 FAM106AQ4KMX7 169 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 PRR31Q5SQ13 230 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 MAP1LC3AQ9H492 121 aa11.41□□□□□ -0.58
COL9A1-208ENST00000489611 CSMD1Q96PZ7 3565 aa11.4□□□□□ -0.58
COL9A1-208ENST00000489611 GCN1Q92616 2671 aaKnown RBP11.4□□□□□ -0.58
COL9A1-208ENST00000489611 IGKV3D-20A0A0C4DH25 116 aa11.4□□□□□ -0.58
COL9A1-208ENST00000489611 IGHV7-4-1A0A0J9YVY3 117 aa11.4□□□□□ -0.58
COL9A1-208ENST00000489611 SOCS3O14543 225 aa11.4□□□□□ -0.58
COL9A1-208ENST00000489611 HBDP02042 147 aa11.4□□□□□ -0.58
COL9A1-208ENST00000489611 UNQ9165/PRO28630Q6UXU0 137 aa11.4□□□□□ -0.58
COL9A1-208ENST00000489611 KRTAP1-3Q8IUG1 177 aa11.4□□□□□ -0.58
COL9A1-208ENST00000489611 SNAI2O43623 268 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 DPF1Q92782 380 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 Q96MF0 132 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 PEF1Q9UBV8 284 aaKnown RBP11.39□□□□□ -0.59
COL9A1-208ENST00000489611 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 SMAD7O15105 426 aaKnown RBP11.39□□□□□ -0.59
COL9A1-208ENST00000489611 TCAPO15273 167 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 LOXL1Q08397 574 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-208ENST00000489611 FOXE3Q13461 319 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 PSMG4Q5JS54 123 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 GPHB5Q86YW7 130 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 KLK15Q9H2R5 256 aa11.39□□□□□ -0.59
COL9A1-208ENST00000489611 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
COL9A1-208ENST00000489611 AVPP01185 164 aa11.38□□□□□ -0.59
COL9A1-208ENST00000489611 TRBV12-3P01733 135 aa11.38□□□□□ -0.59
COL9A1-208ENST00000489611 MED14OSP0DP75 135 aa11.38□□□□□ -0.59
COL9A1-208ENST00000489611 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
COL9A1-208ENST00000489611 RNF185Q96GF1 192 aa11.38□□□□□ -0.59
COL9A1-208ENST00000489611 UFC1Q9Y3C8 167 aa11.38□□□□□ -0.59
COL9A1-208ENST00000489611 APCP25054 2843 aa11.38□□□□□ -0.59
COL9A1-208ENST00000489611 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL9A1-208ENST00000489611 NAV2Q8IVL1 2488 aa11.38□□□□□ -0.59
COL9A1-208ENST00000489611 PSMB8P28062 276 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 SMPXQ9UHP9 88 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 LOC389332A0A1B0GUA5 103 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 PRSS47A8MTI9 375 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 NPYP01303 97 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 IGHV3-11P01762 117 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 ID1P41134 155 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 LGALS9BQ3B8N2 356 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 MAJINQ3KP22 176 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 LGALS9CQ6DKI2 356 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 APRG1Q8IVJ8 170 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 PMCHL2Q9BQD1 86 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
COL9A1-208ENST00000489611 PRSS57Q6UWY2 283 aa11.36□□□□□ -0.59
COL9A1-208ENST00000489611 C11orf21Q9P2W6 132 aa11.36□□□□□ -0.59
COL9A1-208ENST00000489611 A0A096LNJ9 63 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 MUC21A0A0G2JKD1 596 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 MUC21A0A140T8X8 626 aa11.35□□□□□ -0.59
COL9A1-208ENST00000489611 TGFAP01135 160 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms