RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 PRR27Q6MZM9 219 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 ADAMTSL5Q6ZMM2 481 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 C15orf54Q8N8G6 183 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 DYNLRB2Q8TF09 96 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 SMIM12Q96EX1 92 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 VGLL1Q99990 258 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 RNASE7Q9H1E1 156 aaKnown RBP5.81□□□□□ -1.48
SMC6-209ENST00000489535 MS4A6AQ9H2W1 248 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 TUBA4BQ9H853 241 aa5.81□□□□□ -1.48
SMC6-209ENST00000489535 SORL1Q92673 2214 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 RBAKDNA6NC62 111 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 CXorf65A6NEN9 183 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 FBLL1A6NHQ2 334 aaKnown RBP5.8□□□□□ -1.48
SMC6-209ENST00000489535 GATCO43716 136 aaKnown RBP5.8□□□□□ -1.48
SMC6-209ENST00000489535 ID1P41134 155 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 SAMD13Q5VXD3 122 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 NDUFA11Q86Y39 141 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 TMEM183AQ8IXX5 376 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 FAM24BQ8N5W8 94 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 DCANP1Q8TF63 244 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 BIN3Q9NQY0 253 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 OSTCQ9NRP0 149 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 TMEM242Q9NWH2 141 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 ZFP30Q9Y2G7 519 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 URGCP-MRPS24S4R325 110 aa5.8□□□□□ -1.48
SMC6-209ENST00000489535 COLCA2A8K830 154 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 ZNF705GA8MUZ8 300 aaPredicted RBP5.79□□□□□ -1.48
SMC6-209ENST00000489535 K7EQG2 157 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 ZNF688P0C7X2 276 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 S100PP25815 95 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 PAFAH1B2P68402 229 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 ELOBQ15370 118 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 TMEM78Q5T7P6 136 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 KCNIP4Q6PIL6 250 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 RBPMS2Q6ZRY4 209 aaKnown RBP5.79□□□□□ -1.48
SMC6-209ENST00000489535 FAM231DQ6ZW35 169 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 OR10J6PQ8NGY7 276 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 Q8TAT8 98 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 DAZAP1Q96EP5 407 aaKnown RBP5.79□□□□□ -1.48
SMC6-209ENST00000489535 ZC2HC1AQ96GY0 325 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 YPEL4Q96NS1 127 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 PRR25Q96S07 402 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 NDFIP1Q9BT67 221 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 ZNF492Q9P255 531 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 V9GYV3 84 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 C2CD3Q4AC94 2353 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 CMYA5Q8N3K9 4069 aa5.79□□□□□ -1.48
SMC6-209ENST00000489535 FLNBO75369 2602 aaKnown RBP5.78□□□□□ -1.48
SMC6-209ENST00000489535 TGIF2-C20orf24A0A0A6YYL0 155 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 C19orf71A6NCJ1 209 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 PFN1P07737 140 aaKnown RBP5.78□□□□□ -1.48
SMC6-209ENST00000489535 CXCL1P09341 107 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 ZNF705DP0CH99 300 aaPredicted RBP5.78□□□□□ -1.48
SMC6-209ENST00000489535 ZNF705BP0CI00 300 aaPredicted RBP5.78□□□□□ -1.48
SMC6-209ENST00000489535 ZNF138P52744 262 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 DEFB1P60022 68 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 SNRPD3P62318 126 aaKnown RBP5.78□□□□□ -1.48
SMC6-209ENST00000489535 HIST1H1AQ02539 215 aaPredicted RBP5.78□□□□□ -1.48
SMC6-209ENST00000489535 DEFB114Q30KQ6 69 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 SAPCD1Q5SSQ6 148 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 LINC00322Q6ZN03 302 aaPredicted RBP5.78□□□□□ -1.48
SMC6-209ENST00000489535 C9orf47Q6ZRZ4 202 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 TMEM61Q8N0U2 210 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 GPR61Q9BZJ8 451 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 AGPAT4-IT1Q9H0P7 198 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 IL36BQ9NZH7 164 aa5.78□□□□□ -1.48
SMC6-209ENST00000489535 A0A1W2PPQ1 181 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 F6UB75 175 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 SAP30O75446 220 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 P01737 135 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 CT45A10P0DMU9 189 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 FAM3BP58499 235 aaPredicted RBP5.77□□□□□ -1.49
SMC6-209ENST00000489535 CD300EQ496F6 205 aaPredicted RBP5.77□□□□□ -1.49
SMC6-209ENST00000489535 SMUG1Q53HV7 270 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 PSMG4Q5JS54 123 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 OR8A1Q8NGG7 326 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 LINC00477Q96M19 166 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 IMMP2LQ96T52 175 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 CITED1Q99966 193 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 RPP21Q9H633 154 aaKnown RBP5.77□□□□□ -1.49
SMC6-209ENST00000489535 SIGLEC8Q9NYZ4 499 aa5.77□□□□□ -1.49
SMC6-209ENST00000489535 TMA7Q9Y2S6 64 aaKnown RBP5.77□□□□□ -1.49
SMC6-209ENST00000489535 TRAV2A0A0B4J234 112 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 TRAV25A0A0B4J276 109 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 IZUMO1RA6ND01 250 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 SH2D1AO60880 128 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 CA1P00915 261 aaPredicted RBP5.76□□□□□ -1.49
SMC6-209ENST00000489535 RAB5AP20339 215 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 ZNF80P51504 273 aaPredicted RBP5.76□□□□□ -1.49
SMC6-209ENST00000489535 KRTAP24-1Q3LI83 254 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 COX8CQ7Z4L0 72 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 OR4B1Q8NGF8 309 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 PPP1R14DQ9NXH3 145 aa5.76□□□□□ -1.49
SMC6-209ENST00000489535 TRBV24-1A0A075B6N3 115 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 TRAV9-1A0A075B6T8 112 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 A0A0J9YX75 114 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 SMIM27A0A1W2PRY6 76 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 OR4C46A6NHA9 309 aa5.75□□□□□ -1.49
SMC6-209ENST00000489535 A8MWL6 223 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms