RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 SUMO1P63165 101 aaKnown RBP8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 MUC21Q5SSG8 566 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 C5orf17Q8NAS9 161 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 TVP23CQ96ET8 276 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 PYGO2Q9BRQ0 406 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 TP53TG3Q9ULZ0 132 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 APLNQ9ULZ1 77 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 CBY3A6NI87 242 aa8.69□□□□□ -1.02
SMARCD3-213ENST00000489503 LYRM9A8MSI8 78 aa8.69□□□□□ -1.02
SMARCD3-213ENST00000489503 C1QBP02746 253 aa8.69□□□□□ -1.02
SMARCD3-213ENST00000489503 SEC11BP0C7V7 166 aa8.69□□□□□ -1.02
SMARCD3-213ENST00000489503 ZNF493Q6ZR52 646 aa8.69□□□□□ -1.02
SMARCD3-213ENST00000489503 CCDC28AQ8IWP9 274 aa8.69□□□□□ -1.02
SMARCD3-213ENST00000489503 GSN-AS1Q9NRJ2 163 aa8.69□□□□□ -1.02
SMARCD3-213ENST00000489503 FAM74A7A6NL05 159 aa8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 RGS13O14921 159 aa8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 NMBP08949 121 aa8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 TPT1P13693 172 aaKnown RBP8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 EIF4E3Q8N5X7 224 aaKnown RBP8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 C11orf72Q8NBR9 251 aa8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 C8orf49Q96NF6 230 aa8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 NAGKQ9UJ70 344 aa8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 TIMM8BQ9Y5J9 83 aaPredicted RBP8.68□□□□□ -1.02
SMARCD3-213ENST00000489503 IGHV1OR15-1A0A075B7D0 117 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 TRAV34A0A0B4J273 112 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 TRBV7-9A0A0J9YWB2 115 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 GAGE12BA1L429 117 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 SNURFLB1AK76 121 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 GAGE7O76087 117 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 IFNA7P01567 189 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 IGLV2-11P01706 119 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 GAGE12FP0CL80 117 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 GAGE12GP0CL81 117 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 GAGE12IP0CL82 117 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 STOML3Q8TAV4 291 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 LINC00479Q96M42 142 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 TREM1Q9NP99 234 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 EPDR1Q9UM22 224 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 KLF12Q9Y4X4 402 aa8.67□□□□□ -1.02
SMARCD3-213ENST00000489503 PEX7O00628 323 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 ATP5G3P48201 142 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 EIF5AP63241 154 aaKnown RBP8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 Q6AWC8 147 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 TMEM88Q6PEY1 159 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 Q6ZTI0 123 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 PRNTQ86SH4 94 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 C9orf62Q8N4C0 152 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 ARL6IP6Q8N6S5 226 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 SFT2D1Q8WV19 159 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 ATG101Q9BSB4 218 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 PSG8Q9UQ74 426 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 LENEPQ9Y5L5 61 aa8.66□□□□□ -1.02
SMARCD3-213ENST00000489503 UMAD1C9J7I0 102 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 F5H768 121 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 ZNF80P51504 273 aaPredicted RBP8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 NKX2-5P52952 324 aaPredicted RBP8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 FLI1Q01543 452 aaPredicted RBP8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 TMEM183BQ1AE95 376 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 ANXA2RQ3ZCQ2 193 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 CST9LP1Q5W188 147 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 TMEM183AQ8IXX5 376 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 LINC00612Q8N6U2 182 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 ZNF680Q8NEM1 530 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 NDUFAF3Q9BU61 184 aa8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.02
SMARCD3-213ENST00000489503 TRGV1A0A0A0MS02 117 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 SERTM2A0A1B0GWG4 89 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 K7EQM0 130 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 PAGE4O60829 102 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 ATP5G1P05496 136 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 TCL1AP56279 114 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 ZFP69Q49AA0 526 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 Q86TA4 180 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 TMEM75Q8N9X5 138 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 NDFIP1Q9BT67 221 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
SMARCD3-213ENST00000489503 DNAH6Q9C0G6 4158 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 GCGP01275 180 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 H2AFB1P0C5Y9 115 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 TCTAP57738 103 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 ZNF415Q09FC8 603 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 DAZ2Q13117 558 aaKnown RBP8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 LGALS9CQ6DKI2 356 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 DPPA3Q6W0C5 159 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 ARL2-SNX15V9GYD0 113 aa8.63□□□□□ -1.03
SMARCD3-213ENST00000489503 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
SMARCD3-213ENST00000489503 GNRH2O43555 120 aa8.62□□□□□ -1.03
SMARCD3-213ENST00000489503 TYMSP04818 313 aa8.62□□□□□ -1.03
SMARCD3-213ENST00000489503 HOXA5P20719 270 aa8.62□□□□□ -1.03
SMARCD3-213ENST00000489503 CCL20P78556 96 aa8.62□□□□□ -1.03
SMARCD3-213ENST00000489503 IBA57Q5T440 356 aaKnown RBP8.62□□□□□ -1.03
SMARCD3-213ENST00000489503 FAM159AQ6UWV7 190 aa8.62□□□□□ -1.03
SMARCD3-213ENST00000489503 SLC51BQ86UW2 128 aa8.62□□□□□ -1.03
SMARCD3-213ENST00000489503 TRGV2A0A075B6R0 118 aa8.61□□□□□ -1.03
SMARCD3-213ENST00000489503 SCO2A0A1W2PP80 73 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms