RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 ARL14EPLP0DKL9 152 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 PRR9Q5T870 116 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 Q6AWC8 147 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 HYLS1Q96M11 299 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 GSN-AS1Q9NRJ2 163 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 SPINK4O60575 86 aa13.31□□□□□ -0.28
MRPL55-230ENST00000489430 CXorf1O96002 111 aa13.31□□□□□ -0.28
MRPL55-230ENST00000489430 ATG101Q9BSB4 218 aa13.31□□□□□ -0.28
MRPL55-230ENST00000489430 ACTR3CQ9C0K3 210 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-230ENST00000489430 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
MRPL55-230ENST00000489430 GCHFRP30047 84 aa13.3□□□□□ -0.28
MRPL55-230ENST00000489430 CCL18P55774 89 aa13.3□□□□□ -0.28
MRPL55-230ENST00000489430 RPL7L1Q6DKI1 246 aaKnown RBP13.3□□□□□ -0.28
MRPL55-230ENST00000489430 Q6ZTI0 123 aa13.3□□□□□ -0.28
MRPL55-230ENST00000489430 ARPC5LQ9BPX5 153 aa13.3□□□□□ -0.28
MRPL55-230ENST00000489430 TRGV2A0A075B6R0 118 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 G3V3Q6 166 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 HMGB3O15347 200 aaKnown RBP13.29□□□□□ -0.28
MRPL55-230ENST00000489430 EIF3GO75821 320 aaKnown RBP eCLIP13.29□□□□□ -0.28
MRPL55-230ENST00000489430 NUDT3O95989 172 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 OR5I1Q13606 314 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 C5orf17Q8NAS9 161 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 SH3BGRL3Q9H299 93 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 TP53TG3Q9ULZ0 132 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 KLF12Q9Y4X4 402 aa13.29□□□□□ -0.28
MRPL55-230ENST00000489430 TRGV1A0A0A0MS02 117 aa13.28□□□□□ -0.28
MRPL55-230ENST00000489430 K7EQM0 130 aa13.28□□□□□ -0.28
MRPL55-230ENST00000489430 TDRG1Q3Y452 100 aa13.28□□□□□ -0.28
MRPL55-230ENST00000489430 Q6ZR54 194 aa13.28□□□□□ -0.28
MRPL55-230ENST00000489430 TRAV26-1A0A087WT03 109 aa13.27□□□□□ -0.29
MRPL55-230ENST00000489430 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.29
MRPL55-230ENST00000489430 HOXA5P20719 270 aa13.27□□□□□ -0.29
MRPL55-230ENST00000489430 ZNF415Q09FC8 603 aa13.27□□□□□ -0.29
MRPL55-230ENST00000489430 FAM159AQ6UWV7 190 aa13.27□□□□□ -0.29
MRPL55-230ENST00000489430 TMPRSS5Q9H3S3 457 aa13.27□□□□□ -0.29
MRPL55-230ENST00000489430 TRGV11A0A075B6L2 103 aa13.26□□□□□ -0.29
MRPL55-230ENST00000489430 TRAV21A0A0B4J279 112 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 CTXND1A0A1B0GTU2 59 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 A0A1W2PRE2 83 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 ARPC5O15511 151 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 TCRAP04437 139 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 SLAQ13239 276 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 Q6ZQT7 251 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 SPXQ9BT56 116 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 NDFIP1Q9BT67 221 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 TREM1Q9NP99 234 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 RPH3ALQ9UNE2 315 aa13.25□□□□□ -0.29
MRPL55-230ENST00000489430 HECTD4Q9Y4D8 3996 aa13.24□□□□□ -0.29
MRPL55-230ENST00000489430 ZNF345Q14585 488 aa13.24□□□□□ -0.29
MRPL55-230ENST00000489430 SOHLH1Q5JUK2 328 aa13.24□□□□□ -0.29
MRPL55-230ENST00000489430 AKR1C8PQ5T2L2 129 aa13.24□□□□□ -0.29
MRPL55-230ENST00000489430 ZNRF2Q8NHG8 242 aa13.24□□□□□ -0.29
MRPL55-230ENST00000489430 NKX6-2Q9C056 277 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-230ENST00000489430 TRAV8-1A0A0A6YYK1 113 aa13.23□□□□□ -0.29
MRPL55-230ENST00000489430 M0R2N4 97 aa13.23□□□□□ -0.29
MRPL55-230ENST00000489430 SUMO1P63165 101 aaKnown RBP13.23□□□□□ -0.29
MRPL55-230ENST00000489430 GNG5P63218 68 aa13.23□□□□□ -0.29
MRPL55-230ENST00000489430 MUC21Q5SSG8 566 aa13.23□□□□□ -0.29
MRPL55-230ENST00000489430 RASL10AQ92737 203 aa13.23□□□□□ -0.29
MRPL55-230ENST00000489430 KCNS1Q96KK3 526 aa13.23□□□□□ -0.29
MRPL55-230ENST00000489430 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
MRPL55-230ENST00000489430 IGLV2-18A0A075B6J9 118 aa13.22□□□□□ -0.29
MRPL55-230ENST00000489430 HMSDA8MTL9 139 aa13.22□□□□□ -0.29
MRPL55-230ENST00000489430 GGTLC3B5MD39 225 aa13.22□□□□□ -0.29
MRPL55-230ENST00000489430 CYB561D1Q8N8Q1 229 aa13.22□□□□□ -0.29
MRPL55-230ENST00000489430 TVP23CQ96ET8 276 aa13.22□□□□□ -0.29
MRPL55-230ENST00000489430 CYTL1Q9NRR1 136 aa13.22□□□□□ -0.29
MRPL55-230ENST00000489430 MDFICQ9P1T7 246 aa13.22□□□□□ -0.29
MRPL55-230ENST00000489430 LINC00588Q9Y4M8 146 aa13.22□□□□□ -0.29
MRPL55-230ENST00000489430 DNAH2Q9P225 4427 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 A0A0J9YY99 117 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 ZNF726P1Q15940 193 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 TMEM183BQ1AE95 376 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 SSX7Q7RTT5 188 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 TMEM183AQ8IXX5 376 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 KCNRGQ8N5I3 272 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 TMEM75Q8N9X5 138 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 VSIG2Q96IQ7 327 aa13.21□□□□□ -0.29
MRPL55-230ENST00000489430 RTL8CO15255 209 aa13.2□□□□□ -0.3
MRPL55-230ENST00000489430 SAPCD1Q5SSQ6 148 aa13.2□□□□□ -0.3
MRPL55-230ENST00000489430 IQCF2Q8IXL9 164 aa13.2□□□□□ -0.3
MRPL55-230ENST00000489430 UPK3BQ9BT76 320 aa13.2□□□□□ -0.3
MRPL55-230ENST00000489430 SDF2L1Q9HCN8 221 aa13.2□□□□□ -0.3
MRPL55-230ENST00000489430 MRPL16Q9NX20 251 aaKnown RBP13.2□□□□□ -0.3
MRPL55-230ENST00000489430 PRO0255Q9UI72 69 aa13.2□□□□□ -0.3
MRPL55-230ENST00000489430 PSG8Q9UQ74 426 aa13.2□□□□□ -0.3
MRPL55-230ENST00000489430 NBDYA0A0U1RRE5 68 aa13.19□□□□□ -0.3
MRPL55-230ENST00000489430 IGLV2-11P01706 119 aa13.19□□□□□ -0.3
MRPL55-230ENST00000489430 FLI1Q01543 452 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-230ENST00000489430 C1orf134Q5TEV5 83 aa13.19□□□□□ -0.3
MRPL55-230ENST00000489430 IGHV3-16A0A0C4DH30 117 aa13.18□□□□□ -0.3
MRPL55-230ENST00000489430 A0A0D9SG52 128 aa13.18□□□□□ -0.3
MRPL55-230ENST00000489430 ZFP69Q49AA0 526 aa13.18□□□□□ -0.3
MRPL55-230ENST00000489430 HIST1H2BAQ96A08 127 aa13.18□□□□□ -0.3
MRPL55-230ENST00000489430 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
MRPL55-230ENST00000489430 NAGKQ9UJ70 344 aa13.18□□□□□ -0.3
MRPL55-230ENST00000489430 FAT2Q9NYQ8 4349 aa13.17□□□□□ -0.3
MRPL55-230ENST00000489430 A0A096LPF7 62 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms