RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TNFSF18Q9UNG2 199 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 WDR97A6NE52 1622 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 KIDINS220Q9ULH0 1771 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 A0A096LPI6 279 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 IGLV3-32A0A0A0MS00 114 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.53□□□□□ -2.32
CD46-215ENST00000488596 C3orf85A0A1B0GTC6 90 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 A0A1B0GW64 132 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 C9JAW5 83 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 TNFSF15O95150 251 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 OR2H2O95918 312 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 PPYP01298 95 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 HBDP02042 147 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 DBIP07108 87 aaKnown RBP0.53□□□□□ -2.32
CD46-215ENST00000488596 PAEPP09466 180 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 FOXA3P55318 350 aaPredicted RBP0.53□□□□□ -2.32
CD46-215ENST00000488596 LSM3P62310 102 aaKnown RBP0.53□□□□□ -2.32
CD46-215ENST00000488596 PSPHP78330 225 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 NEDD8Q15843 81 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 HSD17B12Q53GQ0 312 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 Q5XG85 94 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 FOXI2Q6ZQN5 318 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 KRTAP19-3Q7Z4W3 81 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 LINC00269Q8N2A0 174 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 PSMF1Q92530 271 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 CALML5Q9NZT1 146 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 HIGD1AQ9Y241 93 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 MYH6P13533 1939 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 FGD6Q6ZV73 1430 aa0.53□□□□□ -2.32
CD46-215ENST00000488596 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.33
CD46-215ENST00000488596 SPAG17Q6Q759 2223 aa0.53□□□□□ -2.33
CD46-215ENST00000488596 CNTRLQ7Z7A1 2325 aa0.53□□□□□ -2.33
CD46-215ENST00000488596 ATG2AQ2TAZ0 1938 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 MED12Q93074 2177 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 KNTC1P50748 2209 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 JMJD7-PLA2G4BH0Y9G9 81 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 UQCRQO14949 82 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 EDF1O60869 148 aaKnown RBP0.52□□□□□ -2.33
CD46-215ENST00000488596 MT-ND4LP03901 98 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 TCRAP04437 139 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 SLC25A5P05141 298 aaKnown RBP0.52□□□□□ -2.33
CD46-215ENST00000488596 SCTP09683 121 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 CCL4P13236 92 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 ARPC4P59998 168 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 CKS1BP61024 79 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 BLCAPP62952 87 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 MIR22HGQ0VDD5 57 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 SMCO1Q147U7 214 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 MORN2Q502X0 79 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 GLIPR1L1Q6UWM5 242 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 OTOSQ8NHW6 89 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 MAFIPQ8WZ33 124 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 MAGOHBQ96A72 148 aaKnown RBP0.52□□□□□ -2.33
CD46-215ENST00000488596 CIB3Q96Q77 187 aaPredicted RBP0.52□□□□□ -2.33
CD46-215ENST00000488596 NABP2Q9BQ15 211 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 LPAR5Q9H1C0 372 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 BANF2Q9H503 90 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 HSPB8Q9UJY1 196 aa0.52□□□□□ -2.33
CD46-215ENST00000488596 LOC107984156A0A0G2JMH3 177 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 OVOS2A0A0J9YW53 1432 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 PNMA8CA0A1B0GUJ8 204 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 A0A1W2PPM0 123 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 PLXNA2O75051 1894 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 SULT1C4O75897 302 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 IGHV3-33P01772 117 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 SLC25A4P12235 298 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 HIST1H1BP16401 226 aaKnown RBP0.51□□□□□ -2.33
CD46-215ENST00000488596 CKS2P33552 79 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 MYH9P35579 1960 aaKnown RBP0.51□□□□□ -2.33
CD46-215ENST00000488596 ETV6P41212 452 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 PCBD1P61457 104 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 SNRPD3P62318 126 aaKnown RBP0.51□□□□□ -2.33
CD46-215ENST00000488596 ARHGAP31Q2M1Z3 1444 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 SMIM21Q3B7S5 101 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 OVOS2Q6IE36 1432 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 LINC00299Q6ZSB3 139 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 ARL17AQ8IVW1 177 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 CTTNBP2Q8WZ74 1663 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 LIMD2Q9BT23 127 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 WFDC10AQ9H1F0 79 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 SLC35B3Q9H1N7 401 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 MPC1Q9Y5U8 109 aa0.51□□□□□ -2.33
CD46-215ENST00000488596 KIAA0100Q14667 2235 aaKnown RBP0.5□□□□□ -2.33
CD46-215ENST00000488596 CITO14578 2027 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 LRP5O75197 1615 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 SYNJ1O43426 1573 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 TRAV23DV6A0A075B6W5 121 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 IFITM5A6NNB3 132 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 BBIP1A8MTZ0 92 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 CDC42EP2O14613 210 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 SMIM24O75264 130 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 KDELR1P24390 212 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 DNAJB13P59910 316 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 S100A12P80511 92 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 QRFPP83859 136 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 ASB16-AS1Q495Z4 193 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 CCSMST1Q4G0I0 132 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 TMEM244Q5VVB8 128 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 IZUMO2Q6UXV1 221 aa0.5□□□□□ -2.33
CD46-215ENST00000488596 TMEM91Q6ZNR0 172 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms