RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 KRTDAPP60985 99 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 TM4SF20Q53R12 229 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 KIR2DL5AQ8N109 375 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 ZNF738Q8NE65 137 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 U3KQK5 164 aa12.15□□□□□ -0.46
RAPGEF3-211ENST00000488250 M0R2Z0 102 aa12.14□□□□□ -0.47
RAPGEF3-211ENST00000488250 LINC00614P0C842 121 aa12.14□□□□□ -0.47
RAPGEF3-211ENST00000488250 SAMD13Q5VXD3 122 aa12.14□□□□□ -0.47
RAPGEF3-211ENST00000488250 FAM104BQ5XKR9 115 aa12.14□□□□□ -0.47
RAPGEF3-211ENST00000488250 RNF152Q8N8N0 203 aa12.14□□□□□ -0.47
RAPGEF3-211ENST00000488250 UFC1Q9Y3C8 167 aa12.14□□□□□ -0.47
RAPGEF3-211ENST00000488250 TMEM213A2RRL7 107 aa12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 HOXA3O43365 443 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 C3orf79P0CE67 100 aa12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 RAB4AP20338 218 aa12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 DEFA6Q01524 100 aa12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 CREBBPQ92793 2442 aa12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 ZANQ9Y493 2812 aa12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 FAM181BA6NEQ2 426 aa12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 Q8N2B8 174 aa12.13□□□□□ -0.47
RAPGEF3-211ENST00000488250 ITPR2Q14571 2701 aa12.12□□□□□ -0.47
RAPGEF3-211ENST00000488250 IGKV3D-20A0A0C4DH25 116 aa12.12□□□□□ -0.47
RAPGEF3-211ENST00000488250 TRBV7-9A0A0J9YWB2 115 aa12.12□□□□□ -0.47
RAPGEF3-211ENST00000488250 C10orf99Q6UWK7 81 aa12.12□□□□□ -0.47
RAPGEF3-211ENST00000488250 TEX29Q8N6K0 151 aa12.12□□□□□ -0.47
RAPGEF3-211ENST00000488250 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
RAPGEF3-211ENST00000488250 C11orf21Q9P2W6 132 aa12.12□□□□□ -0.47
RAPGEF3-211ENST00000488250 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 REC114Q7Z4M0 266 aa12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 TMEM191AQ9H0A3 160 aa12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 LGALS1P09382 135 aaKnown RBP12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 OR5AL1P0C617 328 aa12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 TWIST1Q15672 202 aa12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 FAM19A4Q96LR4 140 aa12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 UBE2E2Q96LR5 201 aa12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 C20orf144Q9BQM9 153 aa12.11□□□□□ -0.47
RAPGEF3-211ENST00000488250 IGHV1-24A0A0C4DH33 117 aa12.1□□□□□ -0.47
RAPGEF3-211ENST00000488250 C2orf70A6NJV1 201 aa12.1□□□□□ -0.47
RAPGEF3-211ENST00000488250 M0QZ24 198 aa12.1□□□□□ -0.47
RAPGEF3-211ENST00000488250 RPL11P62913 178 aaKnown RBP12.1□□□□□ -0.47
RAPGEF3-211ENST00000488250 AMN1Q8IY45 258 aa12.1□□□□□ -0.47
RAPGEF3-211ENST00000488250 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
RAPGEF3-211ENST00000488250 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
RAPGEF3-211ENST00000488250 LGALS9O00182 355 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 MRPL51Q4U2R6 128 aaKnown RBP12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 EBLN2Q6P2I7 272 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 ZFAND2AQ8N6M9 145 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 TDRG1Q3Y452 100 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 TMEM86BQ8N661 226 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 OR8A1Q8NGG7 326 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 VAMP8Q9BV40 100 aa12.09□□□□□ -0.47
RAPGEF3-211ENST00000488250 D6R8Y8 96 aa12.08□□□□□ -0.48
RAPGEF3-211ENST00000488250 DCANP1Q8TF63 244 aa12.08□□□□□ -0.48
RAPGEF3-211ENST00000488250 IGHV4-4A0A075B6R2 117 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 MUC21A0A0G2JKD1 596 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 MUC21A0A140T8X8 626 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 CRXO43186 299 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 ID1P41134 155 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 MUC21Q5SSG8 566 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 PRR9Q5T870 116 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 PRELID3AQ96N28 172 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 SNAI2O43623 268 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 PPBPP02775 128 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 EDN2P20800 178 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 PMCHL1Q16048 86 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 AP5S1Q9NUS5 200 aa12.07□□□□□ -0.48
RAPGEF3-211ENST00000488250 TRAV21A0A0B4J279 112 aa12.06□□□□□ -0.48
RAPGEF3-211ENST00000488250 WFDC11Q8NEX6 87 aa12.06□□□□□ -0.48
RAPGEF3-211ENST00000488250 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
RAPGEF3-211ENST00000488250 TMEM70Q9BUB7 260 aa12.06□□□□□ -0.48
RAPGEF3-211ENST00000488250 MSRB1Q9NZV6 116 aa12.06□□□□□ -0.48
RAPGEF3-211ENST00000488250 LEPROTL1O95214 131 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 SSTP61278 116 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 PRSS3P2Q8NHM4 247 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 MXRA5Q9NR99 2828 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 CSN3P07498 182 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 CACNG7P62955 275 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 FA2HQ7L5A8 372 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 LAMTOR2Q9Y2Q5 125 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 PAM16Q9Y3D7 125 aa12.05□□□□□ -0.48
RAPGEF3-211ENST00000488250 TEX15Q9BXT5 2789 aa12.04□□□□□ -0.48
RAPGEF3-211ENST00000488250 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
RAPGEF3-211ENST00000488250 A0A087WW49 117 aa12.04□□□□□ -0.48
RAPGEF3-211ENST00000488250 CKS2P33552 79 aa12.04□□□□□ -0.48
RAPGEF3-211ENST00000488250 SIGLEC8Q9NYZ4 499 aa12.04□□□□□ -0.48
RAPGEF3-211ENST00000488250 IGKV3-7A0A075B6H7 116 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 Q6ZQT7 251 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 MS4A6AQ9H2W1 248 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 HSPB8Q9UJY1 196 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 F6UB75 175 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 SYS1-DBNDD2H3BUS1 97 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 HOXD3P31249 432 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 IFI27P40305 119 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 DEFB1P60022 68 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 HIST2H2BCQ6DN03 193 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 MIEN1Q9BRT3 115 aa12.03□□□□□ -0.48
RAPGEF3-211ENST00000488250 MED14OSP0DP75 135 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms