RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TRAV1-1A0A0B4J248 108 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 SCO2A0A1W2PP80 73 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 CXorf65A6NEN9 183 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 H7BYZ3 331 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 FLI1Q01543 452 aaPredicted RBP12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 Q6ZTC4 211 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 NIPSNAP3BQ9BS92 247 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 ATG101Q9BSB4 218 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 TREM1Q9NP99 234 aa12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 PLECQ15149 4684 aaKnown RBP12.24□□□□□ -0.45
SHROOM1-205ENST00000488072 ARL6IP6Q8N6S5 226 aa12.23□□□□□ -0.45
SHROOM1-205ENST00000488072 C11orf21Q9P2W6 132 aa12.23□□□□□ -0.45
SHROOM1-205ENST00000488072 DKK2Q9UBU2 259 aa12.23□□□□□ -0.45
SHROOM1-205ENST00000488072 TMEM256Q8N2U0 113 aa12.22□□□□□ -0.45
SHROOM1-205ENST00000488072 TMEM75Q8N9X5 138 aa12.22□□□□□ -0.45
SHROOM1-205ENST00000488072 RNASE8Q8TDE3 154 aaKnown RBP12.22□□□□□ -0.45
SHROOM1-205ENST00000488072 ARL2-SNX15V9GYD0 113 aa12.22□□□□□ -0.45
SHROOM1-205ENST00000488072 C11orf94C9JXX5 98 aa12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 C3orf84H3BNL1 204 aa12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 NMBP08949 121 aa12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 Q86TA4 180 aa12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 C20orf144Q9BQM9 153 aa12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 NOP10Q9NPE3 64 aaKnown RBP12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 NAGKQ9UJ70 344 aa12.21□□□□□ -0.45
SHROOM1-205ENST00000488072 IGHV1OR15-1A0A075B7D0 117 aa12.2□□□□□ -0.46
SHROOM1-205ENST00000488072 TEX46H3BTG2 121 aa12.2□□□□□ -0.46
SHROOM1-205ENST00000488072 Q6AWC8 147 aa12.2□□□□□ -0.46
SHROOM1-205ENST00000488072 NHLRC2Q8NBF2 726 aa12.2□□□□□ -0.46
SHROOM1-205ENST00000488072 C11orf72Q8NBR9 251 aa12.2□□□□□ -0.46
SHROOM1-205ENST00000488072 DERL1Q9BUN8 251 aa12.2□□□□□ -0.46
SHROOM1-205ENST00000488072 KLF12Q9Y4X4 402 aa12.2□□□□□ -0.46
SHROOM1-205ENST00000488072 TRBV7-9A0A0J9YWB2 115 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 CBY3A6NI87 242 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 RGS13O14921 159 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 GNRH2O43555 120 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 GCGP01275 180 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 SPART-AS1P0CW21 52 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 CRIP1P50238 77 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 ANXA2RQ3ZCQ2 193 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 C2CD4CQ8TF44 421 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 HIST1H2BAQ96A08 127 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 PYGO2Q9BRQ0 406 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 MDFICQ9P1T7 246 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 LENEPQ9Y5L5 61 aa12.19□□□□□ -0.46
SHROOM1-205ENST00000488072 SERTM2A0A1B0GWG4 89 aa12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 K7EQM0 130 aa12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 DEFB130BP0DP73 79 aa12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 DEFB130AP0DP74 79 aa12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 AKR1C3P42330 323 aa12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 EIF4E3Q8N5X7 224 aaKnown RBP12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 ZNF680Q8NEM1 530 aa12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 TMEM263Q8WUH6 116 aaKnown RBP12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 C16orf74Q96GX8 76 aa12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 NKX6-2Q9C056 277 aaPredicted RBP12.18□□□□□ -0.46
SHROOM1-205ENST00000488072 TMEM189A5PLL7 270 aa12.17□□□□□ -0.46
SHROOM1-205ENST00000488072 HTN3P15516 51 aa12.17□□□□□ -0.46
SHROOM1-205ENST00000488072 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
SHROOM1-205ENST00000488072 ZC2HC1AQ96GY0 325 aa12.17□□□□□ -0.46
SHROOM1-205ENST00000488072 MANBALQ9NQG1 85 aa12.17□□□□□ -0.46
SHROOM1-205ENST00000488072 BCL2P10415 239 aa12.16□□□□□ -0.46
SHROOM1-205ENST00000488072 TMEM183BQ1AE95 376 aa12.16□□□□□ -0.46
SHROOM1-205ENST00000488072 TMEM183AQ8IXX5 376 aa12.16□□□□□ -0.46
SHROOM1-205ENST00000488072 LINC00467Q9BRT7 94 aa12.16□□□□□ -0.46
SHROOM1-205ENST00000488072 NDFIP1Q9BT67 221 aa12.16□□□□□ -0.46
SHROOM1-205ENST00000488072 TRAV21A0A0B4J279 112 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 GAGE12BA1L429 117 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 RAB19A4D1S5 217 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 GAGE7O76087 117 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 GAGE12FP0CL80 117 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 GAGE12GP0CL81 117 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 GAGE12IP0CL82 117 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 PPT1P50897 306 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 UBE2G1P62253 170 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 BLOC1S1P78537 153 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 SMUG1Q53HV7 270 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 TEX261Q6UWH6 196 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 Q6ZTI0 123 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 LYPD6BQ8NI32 183 aa12.15□□□□□ -0.46
SHROOM1-205ENST00000488072 LTAP01374 205 aa12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 TYMSP04818 313 aa12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 DAD1P61803 113 aa12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 ZNF493Q6ZR52 646 aa12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 FMC1Q96HJ9 113 aa12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 TIMM8BQ9Y5J9 83 aaPredicted RBP12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 DNAH1Q9P2D7 4330 aa12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 ALMS1Q8TCU4 4167 aa12.14□□□□□ -0.47
SHROOM1-205ENST00000488072 SACSQ9NZJ4 4579 aa12.13□□□□□ -0.47
SHROOM1-205ENST00000488072 IGKV3D-20A0A0C4DH25 116 aa12.13□□□□□ -0.47
SHROOM1-205ENST00000488072 SH2D1AO60880 128 aa12.13□□□□□ -0.47
SHROOM1-205ENST00000488072 RPL35P42766 123 aaKnown RBP12.13□□□□□ -0.47
SHROOM1-205ENST00000488072 SAPCD1Q5SSQ6 148 aa12.13□□□□□ -0.47
SHROOM1-205ENST00000488072 FAM159AQ6UWV7 190 aa12.13□□□□□ -0.47
SHROOM1-205ENST00000488072 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
SHROOM1-205ENST00000488072 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
SHROOM1-205ENST00000488072 DEFB131BA0A096LNP1 70 aa12.12□□□□□ -0.47
SHROOM1-205ENST00000488072 IGHV3-16A0A0C4DH30 117 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms