RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 LECT2O14960 151 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 RBFOX2O43251 390 aaKnown RBP eCLIP2.78□□□□□ -1.96
BRCA1-217ENST00000487825 HPGDSO60760 199 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 SLC22A5O76082 557 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 HLA-DQB1P01920 261 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 RLN2P04090 185 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 CD37P11049 281 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 S100A1P23297 94 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 QRFPP83859 136 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 PRCDQ00LT1 54 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 PDZD11Q5EBL8 140 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 XAF1Q6GPH4 301 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 EBLN2Q6P2I7 272 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 ACOT7LQ6ZUV0 252 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 MRPL52Q86TS9 123 aaKnown RBP2.78□□□□□ -1.96
BRCA1-217ENST00000487825 LHFPL3Q86UP9 236 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 LINC01561Q8N1V8 128 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 OR11H7Q8NGC8 314 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 COQ8AQ8NI60 647 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 DYNC2LI1Q8TCX1 351 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 RNASEH2CQ8TDP1 164 aaKnown RBP2.78□□□□□ -1.96
BRCA1-217ENST00000487825 TMEM203Q969S6 136 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 LINC00052Q96N35 136 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 LPAR5Q9H1C0 372 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 DIABLOQ9NR28 239 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 TAS2R8Q9NYW2 309 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 DOK5Q9P104 306 aa2.78□□□□□ -1.96
BRCA1-217ENST00000487825 PAIP2BQ9ULR5 123 aaKnown RBP2.78□□□□□ -1.96
BRCA1-217ENST00000487825 TRAV12-2A0A075B6T6 113 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 IGKV1D-13A0A0B4J2D9 117 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 FAM231BA6NCW3 169 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 EFCAB10A6NFE3 127 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 K7EN84 100 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 ZNF324O75467 553 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-217ENST00000487825 DUSP14O95147 198 aaKnown RBP2.77□□□□□ -1.97
BRCA1-217ENST00000487825 HPRT1P00492 218 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 IGKV1-13P0DP09 117 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 HTN1P15515 57 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 CAV2P51636 162 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 RPS11P62280 158 aaKnown RBP eCLIP2.77□□□□□ -1.97
BRCA1-217ENST00000487825 MLLT11Q13015 90 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-217ENST00000487825 FLOT2Q14254 428 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 LAGE3Q14657 143 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 TAL2Q16559 108 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 TIGITQ495A1 244 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 Q499Y3 187 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 CCDC58Q4VC31 144 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 LINC01556Q5JQF7 62 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 RPL22L1Q6P5R6 122 aaKnown RBP2.77□□□□□ -1.97
BRCA1-217ENST00000487825 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 NEGR1Q7Z3B1 354 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 CEND1Q8N111 149 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 OR1S2Q8NGQ3 325 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 APH1BQ8WW43 257 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 TMEM230Q96A57 120 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 GPR146Q96CH1 333 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 SMIM19Q96E16 107 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 ARHGAP5-AS1Q96IT6 56 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 TMEM56Q96MV1 263 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 LINC01587Q99440 93 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 PECRQ9BY49 303 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 SPANXB1Q9NS25 103 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-217ENST00000487825 VAX2Q9UIW0 290 aa2.77□□□□□ -1.97
BRCA1-217ENST00000487825 ISLRO14498 428 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 GSTZ1O43708 216 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-217ENST00000487825 MPDU1O75352 247 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 IGKV1-17P01599 117 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 ST3GAL4Q11206 333 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 SFXN4Q6P4A7 337 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 Q6ZS49 121 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 Q6ZTI0 123 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 DHFR2Q86XF0 187 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 MAFIPQ8WZ33 124 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 PGLYRP3Q96LB9 341 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 RPRMQ9NS64 109 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 MCUBQ9NWR8 336 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 COMMD9Q9P000 198 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 MRPL36Q9P0J6 103 aaKnown RBP2.76□□□□□ -1.97
BRCA1-217ENST00000487825 ARL2BPQ9Y2Y0 163 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 OR51B2Q9Y5P1 312 aa2.76□□□□□ -1.97
BRCA1-217ENST00000487825 IGKV1D-8A0A087WSZ0 117 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 TMEM235A6NFC5 223 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 MRPS12O15235 138 aaKnown RBP2.75□□□□□ -1.97
BRCA1-217ENST00000487825 LALBAP00709 142 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 NFYAP23511 347 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-217ENST00000487825 CRYBA4P53673 196 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 CLDN12P56749 244 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 RANP62826 216 aaKnown RBP2.75□□□□□ -1.97
BRCA1-217ENST00000487825 DAZ2Q13117 558 aaKnown RBP2.75□□□□□ -1.97
BRCA1-217ENST00000487825 ARL6IP1Q15041 203 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 NDUFA5Q16718 116 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 C1orf100Q5SVJ3 147 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 IBA57Q5T440 356 aaKnown RBP2.75□□□□□ -1.97
BRCA1-217ENST00000487825 HACD4Q5VWC8 232 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 MEDAGQ5VYS4 303 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 OR8G2PQ6IF36 304 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 ZFP41Q8N8Y5 198 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 Q8N976 141 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 OR4X1Q8NH49 305 aa2.75□□□□□ -1.97
BRCA1-217ENST00000487825 CANT1Q8WVQ1 401 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms