RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 ZNF688P0C7X2 276 aa11.02□□□□□ -0.64
FGFR1-222ENST00000487647 LINC01559Q495D7 138 aa11.02□□□□□ -0.64
FGFR1-222ENST00000487647 FOXI2Q6ZQN5 318 aa11.02□□□□□ -0.64
FGFR1-222ENST00000487647 APRG1Q8IVJ8 170 aa11.02□□□□□ -0.64
FGFR1-222ENST00000487647 TMEM61Q8N0U2 210 aa11.02□□□□□ -0.64
FGFR1-222ENST00000487647 SELENOKQ9Y6D0 94 aa11.02□□□□□ -0.64
FGFR1-222ENST00000487647 CUBNO60494 3623 aa11.02□□□□□ -0.64
FGFR1-222ENST00000487647 OR4C46A6NHA9 309 aa11.02□□□□□ -0.65
FGFR1-222ENST00000487647 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.65
FGFR1-222ENST00000487647 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.65
FGFR1-222ENST00000487647 HIST2H2BDQ6DRA6 164 aa11.02□□□□□ -0.65
FGFR1-222ENST00000487647 FRZBQ92765 325 aa11.02□□□□□ -0.65
FGFR1-222ENST00000487647 F8P00451 2351 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 BAHCC1Q9P281 2608 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 A0A0J9YX75 114 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 A0A1B0GW15 77 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BKO60814 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HLA-DQA1P01909 254 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BJP06899 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 TRGC1P0CF51 173 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BOP23527 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BBP33778 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BDP58876 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BCP62807 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 FABP9Q0Z7S8 132 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST2H2BEQ16778 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 NSUN5P1Q3KNT7 163 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.01□□□□□ -0.65
FGFR1-222ENST00000487647 ZFAND2AQ8N6M9 145 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BHQ93079 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BNQ99877 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 HIST1H2BMQ99879 126 aa11.01□□□□□ -0.65
FGFR1-222ENST00000487647 TRAV21A0A0B4J279 112 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 A0A1B0GXF2 115 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 SNURFLB1AK76 121 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 F6UB75 175 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 SPINK4O60575 86 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 ORM1P02763 201 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 S100A8P05109 93 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 KRTAP10-3P60369 221 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 CD300EQ496F6 205 aaPredicted RBP11□□□□□ -0.65
FGFR1-222ENST00000487647 MRPL54Q6P161 138 aaKnown RBP11□□□□□ -0.65
FGFR1-222ENST00000487647 OR2K2Q8NGT1 345 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 BORCS7Q96B45 105 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
FGFR1-222ENST00000487647 GPX1P07203 203 aa10.99□□□□□ -0.65
FGFR1-222ENST00000487647 LEPP41159 167 aa10.99□□□□□ -0.65
FGFR1-222ENST00000487647 CMC4P56277 68 aaPredicted RBP10.99□□□□□ -0.65
FGFR1-222ENST00000487647 HBBP68871 147 aa10.99□□□□□ -0.65
FGFR1-222ENST00000487647 TMEM136Q6ZRR5 245 aa10.99□□□□□ -0.65
FGFR1-222ENST00000487647 C2CD3Q4AC94 2353 aa10.99□□□□□ -0.65
FGFR1-222ENST00000487647 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
FGFR1-222ENST00000487647 KLLNB2CW77 178 aa10.98□□□□□ -0.65
FGFR1-222ENST00000487647 TSPOP30536 169 aa10.98□□□□□ -0.65
FGFR1-222ENST00000487647 RIGQ13278 110 aa10.98□□□□□ -0.65
FGFR1-222ENST00000487647 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
FGFR1-222ENST00000487647 MRPL18Q9H0U6 180 aaKnown RBP10.98□□□□□ -0.65
FGFR1-222ENST00000487647 SETD2Q9BYW2 2564 aaPredicted RBP10.98□□□□□ -0.65
FGFR1-222ENST00000487647 GZMBP10144 247 aa10.98□□□□□ -0.65
FGFR1-222ENST00000487647 DEFB1P60022 68 aa10.98□□□□□ -0.65
FGFR1-222ENST00000487647 RAB4BP61018 213 aa10.98□□□□□ -0.65
FGFR1-222ENST00000487647 SETXQ7Z333 2677 aaKnown RBP10.98□□□□□ -0.65
FGFR1-222ENST00000487647 C5orf52A6NGY3 159 aa10.97□□□□□ -0.65
FGFR1-222ENST00000487647 F2Z2F3 143 aa10.97□□□□□ -0.65
FGFR1-222ENST00000487647 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
FGFR1-222ENST00000487647 ZNF256Q9Y2P7 627 aaPredicted RBP10.97□□□□□ -0.65
FGFR1-222ENST00000487647 TMSB15BA0A087X1C1 80 aa10.96□□□□□ -0.65
FGFR1-222ENST00000487647 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
FGFR1-222ENST00000487647 SAP30O75446 220 aa10.96□□□□□ -0.65
FGFR1-222ENST00000487647 PF4P02776 101 aa10.96□□□□□ -0.65
FGFR1-222ENST00000487647 IGLC6P0CF74 106 aa10.96□□□□□ -0.65
FGFR1-222ENST00000487647 CTRLP40313 264 aa10.96□□□□□ -0.65
FGFR1-222ENST00000487647 DEFB131AP59861 70 aa10.96□□□□□ -0.65
FGFR1-222ENST00000487647 A8MTW9 85 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 IGLV1-51P01701 117 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 APCSP02743 223 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 FRMD6-AS1P0C7T7 363 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 HLA-DRB4P13762 266 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 RNASE4P34096 147 aaKnown RBP10.95□□□□□ -0.66
FGFR1-222ENST00000487647 CAMPP49913 170 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 SNRPEP62304 92 aaKnown RBP10.95□□□□□ -0.66
FGFR1-222ENST00000487647 PRR9Q5T870 116 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 GDF5OSQ5U4N7 250 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 GATD1Q8NB37 220 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 CITED1Q99966 193 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 HLA-DRB4X5D2U9 266 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 CD33P20138 364 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 NDUFA6P56556 154 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
FGFR1-222ENST00000487647 LYZL1Q6UWQ5 148 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 LINC00482Q8N8I6 264 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 CLUHP3Q96NS8 147 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
FGFR1-222ENST00000487647 CDKN1BP46527 198 aa10.94□□□□□ -0.66
FGFR1-222ENST00000487647 FAM110AQ9BQ89 295 aa10.94□□□□□ -0.66
FGFR1-222ENST00000487647 C11orf21Q9P2W6 132 aa10.94□□□□□ -0.66
FGFR1-222ENST00000487647 C7orf71A4D174 169 aa10.93□□□□□ -0.66
FGFR1-222ENST00000487647 H3BMM0 161 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms