RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 TXNDC17Q9BRA2 123 aa10.16□□□□□ -0.78
MCF2L-228ENST00000487354 SRRQ9GZT4 340 aa10.16□□□□□ -0.78
MCF2L-228ENST00000487354 Q9HAA7 133 aa10.16□□□□□ -0.78
MCF2L-228ENST00000487354 C9JCJ5 164 aa10.15□□□□□ -0.78
MCF2L-228ENST00000487354 RPL29P47914 159 aaKnown RBP10.15□□□□□ -0.78
MCF2L-228ENST00000487354 GCSAMLQ5JQS6 135 aa10.15□□□□□ -0.78
MCF2L-228ENST00000487354 TMEM78Q5T7P6 136 aa10.15□□□□□ -0.78
MCF2L-228ENST00000487354 FAM122CQ6P4D5 195 aa10.15□□□□□ -0.78
MCF2L-228ENST00000487354 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
MCF2L-228ENST00000487354 FAM167A-AS1Q96KT0 104 aa10.15□□□□□ -0.78
MCF2L-228ENST00000487354 SLC25A2Q9BXI2 301 aa10.15□□□□□ -0.78
MCF2L-228ENST00000487354 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
MCF2L-228ENST00000487354 CST7O76096 145 aa10.14□□□□□ -0.79
MCF2L-228ENST00000487354 BTCP35070 178 aa10.14□□□□□ -0.79
MCF2L-228ENST00000487354 ZNF266Q14584 549 aa10.14□□□□□ -0.79
MCF2L-228ENST00000487354 GSKIPQ9P0R6 139 aa10.14□□□□□ -0.79
MCF2L-228ENST00000487354 PLA2G2DQ9UNK4 145 aa10.14□□□□□ -0.79
MCF2L-228ENST00000487354 TIMM9Q9Y5J7 89 aa10.14□□□□□ -0.79
MCF2L-228ENST00000487354 TRBV7-9A0A0J9YWB2 115 aa10.13□□□□□ -0.79
MCF2L-228ENST00000487354 UBE2L5PA0A1B0GUS4 154 aa10.13□□□□□ -0.79
MCF2L-228ENST00000487354 ZNF138P52744 262 aa10.13□□□□□ -0.79
MCF2L-228ENST00000487354 Q8N3U1 123 aa10.13□□□□□ -0.79
MCF2L-228ENST00000487354 CHAC2Q8WUX2 184 aa10.13□□□□□ -0.79
MCF2L-228ENST00000487354 UQCC1Q9NVA1 299 aa10.13□□□□□ -0.79
MCF2L-228ENST00000487354 FAM24AA6NFZ4 105 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 CCSO14618 274 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 OXTP01178 125 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 GATA1P15976 413 aaPredicted RBP10.12□□□□□ -0.79
MCF2L-228ENST00000487354 RAB31Q13636 194 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 ZNF846Q147U1 533 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 TMEM183BQ1AE95 376 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 LINC01620Q4KN68 170 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 Q6AWC8 147 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 TMEM183AQ8IXX5 376 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 C12orf45Q8N5I9 185 aaPredicted RBP10.12□□□□□ -0.79
MCF2L-228ENST00000487354 MITD1Q8WV92 249 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 SPXQ9BT56 116 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 SLC25A31Q9H0C2 315 aa10.12□□□□□ -0.79
MCF2L-228ENST00000487354 IGHV3-30P01768 117 aa10.11□□□□□ -0.79
MCF2L-228ENST00000487354 IGHV3-33P01772 117 aa10.11□□□□□ -0.79
MCF2L-228ENST00000487354 IGHV3-30-3P0DP02 117 aa10.11□□□□□ -0.79
MCF2L-228ENST00000487354 IGHV3-30-5P0DP03 117 aa10.11□□□□□ -0.79
MCF2L-228ENST00000487354 PHYHIPLQ96FC7 376 aa10.11□□□□□ -0.79
MCF2L-228ENST00000487354 AAMDCQ9H7C9 122 aa10.11□□□□□ -0.79
MCF2L-228ENST00000487354 IGHV3-16A0A0C4DH30 117 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 IGSF23A1L1A6 192 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 PPT1P50897 306 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 BAXQ07812 192 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 LAGE3Q14657 143 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 BAK1Q16611 211 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 TDRG1Q3Y452 100 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 MIR17HGQ75NE6 70 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 SH2D6Q7Z4S9 175 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 NHLRC2Q8NBF2 726 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 OR4C5Q8NGB2 326 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 FXYD5Q96DB9 178 aa10.1□□□□□ -0.79
MCF2L-228ENST00000487354 LSM5Q9Y4Y9 91 aaKnown RBP10.1□□□□□ -0.79
MCF2L-228ENST00000487354 LECT2O14960 151 aa10.09□□□□□ -0.79
MCF2L-228ENST00000487354 CAV2P51636 162 aa10.09□□□□□ -0.79
MCF2L-228ENST00000487354 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-228ENST00000487354 TRGV11A0A075B6L2 103 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 L7N2F9 121 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 NBEAP1P0C6P0 100 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 FGF7P21781 194 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 BCAP31P51572 246 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 VAMP2P63027 116 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 SLC25A29Q8N8R3 303 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 SDHCQ99643 169 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-228ENST00000487354 NPCDR1Q9BY65 106 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 C20orf85Q9H1P6 137 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 LYRM2Q9NU23 88 aaPredicted RBP10.08□□□□□ -0.8
MCF2L-228ENST00000487354 RNF213Q63HN8 5207 aa10.08□□□□□ -0.8
MCF2L-228ENST00000487354 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 NAP1L6A6NFF2 107 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 M0R2P5 195 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 GNRH2O43555 120 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 OR10J4P0C629 311 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 SULT1A1P50225 295 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 OR10J3Q5JRS4 329 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 LELP1Q5T871 98 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 GPN1Q9HCN4 374 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-228ENST00000487354 LRP2P98164 4655 aa10.07□□□□□ -0.8
MCF2L-228ENST00000487354 TYMSP04818 313 aa10.06□□□□□ -0.8
MCF2L-228ENST00000487354 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
MCF2L-228ENST00000487354 IL15RAQ13261 267 aa10.06□□□□□ -0.8
MCF2L-228ENST00000487354 FAM159AQ6UWV7 190 aa10.06□□□□□ -0.8
MCF2L-228ENST00000487354 DPPA3Q6W0C5 159 aa10.06□□□□□ -0.8
MCF2L-228ENST00000487354 TMEM252Q8N6L7 170 aa10.06□□□□□ -0.8
MCF2L-228ENST00000487354 CIRBP-AS1Q8TBR5 109 aa10.06□□□□□ -0.8
MCF2L-228ENST00000487354 CHAC1Q9BUX1 264 aa10.06□□□□□ -0.8
MCF2L-228ENST00000487354 OR51M1Q9H341 326 aa10.06□□□□□ -0.8
MCF2L-228ENST00000487354 S100A11P31949 105 aa10.05□□□□□ -0.8
MCF2L-228ENST00000487354 NAGKQ9UJ70 344 aa10.05□□□□□ -0.8
MCF2L-228ENST00000487354 TNXBP22105 4242 aa10.05□□□□□ -0.8
MCF2L-228ENST00000487354 PFN1P07737 140 aaKnown RBP10.04□□□□□ -0.8
MCF2L-228ENST00000487354 PAXXQ9BUH6 204 aa10.04□□□□□ -0.8
MCF2L-228ENST00000487354 TM2D2Q9BX73 214 aa10.04□□□□□ -0.8
MCF2L-228ENST00000487354 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
MCF2L-228ENST00000487354 FBLL1A6NHQ2 334 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms