RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PRNTQ86SH4 94 aa14□□□□□ -0.17
PCOLCE-208ENST00000487172 Q8NAQ8 132 aa14□□□□□ -0.17
PCOLCE-208ENST00000487172 C11orf52Q96A22 123 aa14□□□□□ -0.17
PCOLCE-208ENST00000487172 LINC01587Q99440 93 aa14□□□□□ -0.17
PCOLCE-208ENST00000487172 NIPSNAP3BQ9BS92 247 aa14□□□□□ -0.17
PCOLCE-208ENST00000487172 EDA2RQ9HAV5 297 aa14□□□□□ -0.17
PCOLCE-208ENST00000487172 SCO2A0A1W2PP80 73 aa13.99□□□□□ -0.17
PCOLCE-208ENST00000487172 PDE6DO43924 150 aa13.99□□□□□ -0.17
PCOLCE-208ENST00000487172 AKR1C3P42330 323 aa13.99□□□□□ -0.17
PCOLCE-208ENST00000487172 TAS2R60P59551 318 aa13.99□□□□□ -0.17
PCOLCE-208ENST00000487172 ZFP30Q9Y2G7 519 aa13.99□□□□□ -0.17
PCOLCE-208ENST00000487172 RBFOX3A6NFN3 312 aa13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 NDUFS6O75380 124 aaKnown RBP13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 UBE2G1P62253 170 aa13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 RRN3P1Q2M238 152 aa13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 Q6AWC8 147 aa13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 ZNF767PQ75MW2 155 aa13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 PYGO2Q9BRQ0 406 aa13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 LINC00467Q9BRT7 94 aa13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 C11orf68Q9H3H3 251 aaKnown RBP13.98□□□□□ -0.17
PCOLCE-208ENST00000487172 IGHV4-28A0A0C4DH34 117 aa13.97□□□□□ -0.17
PCOLCE-208ENST00000487172 ZNF506Q5JVG8 444 aa13.97□□□□□ -0.17
PCOLCE-208ENST00000487172 COX8CQ7Z4L0 72 aa13.97□□□□□ -0.17
PCOLCE-208ENST00000487172 Q86TA4 180 aa13.97□□□□□ -0.17
PCOLCE-208ENST00000487172 FAM210AQ96ND0 272 aa13.97□□□□□ -0.17
PCOLCE-208ENST00000487172 NBEAL2Q6ZNJ1 2754 aa13.96□□□□□ -0.17
PCOLCE-208ENST00000487172 A0A0J9YWU9 116 aa13.96□□□□□ -0.17
PCOLCE-208ENST00000487172 IFITM2Q01629 132 aa13.96□□□□□ -0.17
PCOLCE-208ENST00000487172 SMUG1Q53HV7 270 aa13.96□□□□□ -0.17
PCOLCE-208ENST00000487172 PCNPQ8WW12 178 aaKnown RBP13.96□□□□□ -0.17
PCOLCE-208ENST00000487172 TMEM189A5PLL7 270 aa13.95□□□□□ -0.18
PCOLCE-208ENST00000487172 LTAP01374 205 aa13.95□□□□□ -0.18
PCOLCE-208ENST00000487172 C8orf49Q96NF6 230 aa13.95□□□□□ -0.18
PCOLCE-208ENST00000487172 COL7A1Q02388 2944 aa13.95□□□□□ -0.18
PCOLCE-208ENST00000487172 TENM3Q9P273 2699 aa13.95□□□□□ -0.18
PCOLCE-208ENST00000487172 TRAV21A0A0B4J279 112 aa13.94□□□□□ -0.18
PCOLCE-208ENST00000487172 ZNF705GA8MUZ8 300 aaPredicted RBP13.94□□□□□ -0.18
PCOLCE-208ENST00000487172 ZNF493Q6ZR52 646 aa13.94□□□□□ -0.18
PCOLCE-208ENST00000487172 TMEM250H0YL14 139 aa13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 GCGP01275 180 aa13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 RPL35P42766 123 aaKnown RBP13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 RAB14P61106 215 aa13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 TOR2AQ5JU69 321 aa13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 Q6ZQT7 251 aa13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 TMEM183AQ8IXX5 376 aa13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 EIF4E3Q8N5X7 224 aaKnown RBP13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 WWC2-AS2Q96NR7 200 aa13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 MED9Q9NWA0 146 aa13.93□□□□□ -0.18
PCOLCE-208ENST00000487172 IGHV1OR15-1A0A075B7D0 117 aa13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 PRM2P04554 102 aa13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 AZU1P20160 251 aa13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 ZNF80P51504 273 aaPredicted RBP13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 ANXA2RQ3ZCQ2 193 aa13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 CLLU1Q5K131 121 aa13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 TMEM263Q8WUH6 116 aaKnown RBP13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 C16orf74Q96GX8 76 aa13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 MLST8Q9BVC4 326 aa13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 EIF5A2Q9GZV4 153 aaKnown RBP13.92□□□□□ -0.18
PCOLCE-208ENST00000487172 RGS13O14921 159 aa13.91□□□□□ -0.18
PCOLCE-208ENST00000487172 DEFB4AO15263 64 aa13.91□□□□□ -0.18
PCOLCE-208ENST00000487172 PFN1P07737 140 aaKnown RBP13.91□□□□□ -0.18
PCOLCE-208ENST00000487172 HTN1P15515 57 aa13.91□□□□□ -0.18
PCOLCE-208ENST00000487172 TDRG1Q3Y452 100 aa13.91□□□□□ -0.18
PCOLCE-208ENST00000487172 BAGE2Q86Y30 109 aa13.91□□□□□ -0.18
PCOLCE-208ENST00000487172 RNASE8Q8TDE3 154 aaKnown RBP13.91□□□□□ -0.18
PCOLCE-208ENST00000487172 DERL1Q9BUN8 251 aa13.91□□□□□ -0.18
PCOLCE-208ENST00000487172 FABP5P3A8MUU1 101 aa13.9□□□□□ -0.18
PCOLCE-208ENST00000487172 FAM159AQ6UWV7 190 aa13.9□□□□□ -0.18
PCOLCE-208ENST00000487172 SMIM12Q96EX1 92 aa13.9□□□□□ -0.18
PCOLCE-208ENST00000487172 SMDT1Q9H4I9 107 aa13.9□□□□□ -0.18
PCOLCE-208ENST00000487172 PLAC8L1A1L4L8 177 aa13.89□□□□□ -0.19
PCOLCE-208ENST00000487172 CRIP1P50238 77 aa13.89□□□□□ -0.19
PCOLCE-208ENST00000487172 ZC2HC1AQ96GY0 325 aa13.89□□□□□ -0.19
PCOLCE-208ENST00000487172 TGP01266 2768 aa13.88□□□□□ -0.19
PCOLCE-208ENST00000487172 CBY3A6NI87 242 aa13.88□□□□□ -0.19
PCOLCE-208ENST00000487172 ZNF674Q2M3X9 581 aa13.88□□□□□ -0.19
PCOLCE-208ENST00000487172 IBA57Q5T440 356 aaKnown RBP13.88□□□□□ -0.19
PCOLCE-208ENST00000487172 IL17DQ8TAD2 202 aa13.88□□□□□ -0.19
PCOLCE-208ENST00000487172 KCNS1Q96KK3 526 aa13.88□□□□□ -0.19
PCOLCE-208ENST00000487172 TEX48A0A1B0GUV7 120 aa13.87□□□□□ -0.19
PCOLCE-208ENST00000487172 RAB19A4D1S5 217 aa13.87□□□□□ -0.19
PCOLCE-208ENST00000487172 SRP19P09132 144 aaKnown RBP13.87□□□□□ -0.19
PCOLCE-208ENST00000487172 SPART-AS1P0CW21 52 aa13.87□□□□□ -0.19
PCOLCE-208ENST00000487172 CENPWQ5EE01 88 aa13.87□□□□□ -0.19
PCOLCE-208ENST00000487172 MUC21Q5SSG8 566 aa13.87□□□□□ -0.19
PCOLCE-208ENST00000487172 DKK2Q9UBU2 259 aa13.87□□□□□ -0.19
PCOLCE-208ENST00000487172 CXorf65A6NEN9 183 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 C9JCJ5 164 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 IGLV2-8P01709 118 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 GNG4P50150 75 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 EMP1P54849 157 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 PEA15Q15121 130 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 FAM162BQ5T6X4 162 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 C11orf72Q8NBR9 251 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 C11orf45Q8TAV5 145 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 PARLQ9H300 379 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 C11orf21Q9P2W6 132 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 TP53TG3Q9ULZ0 132 aa13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 TIMM8BQ9Y5J9 83 aaPredicted RBP13.86□□□□□ -0.19
PCOLCE-208ENST00000487172 TRGV11A0A075B6L2 103 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms