RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 FABP5P3A8MUU1 101 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 B4DSR2 109 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 NDUFA4O00483 81 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 PLXNB1O43157 2135 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 PPIFP30405 207 aaKnown RBP5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 ATP5J2P56134 94 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 HIST1H1AQ02539 215 aaPredicted RBP5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 TDRG1Q3Y452 100 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 SPATA45Q537H7 98 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 FAM104BQ5XKR9 115 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 LYZL1Q6UWQ5 148 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 C9orf47Q6ZRZ4 202 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 FER1L6-AS1Q8NA97 138 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 GLMPQ8WWB7 406 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 ASCL2Q99929 193 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 SNHG12Q9BXW3 62 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 NPFFR1Q9GZQ6 430 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 HSPB8Q9UJY1 196 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 LAMTOR2Q9Y2Q5 125 aa5.4□□□□□ -1.54
SMARCAL1-212ENST00000486983 HIVEP3Q5T1R4 2406 aa5.4□□□□□ -1.55
SMARCAL1-212ENST00000486983 HECTD1Q9ULT8 2610 aa5.4□□□□□ -1.55
SMARCAL1-212ENST00000486983 DOPEY2Q9Y3R5 2298 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 TRAV9-2A0A087WT02 112 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 TRAV8-2A0A0B4J237 113 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 A0A0G2JLM5 398 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 TMEM89A2RUT3 159 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 LINC01548A6NM66 108 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 SYS1-DBNDD2H3BUS1 97 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 J3QLI3 93 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 LEPROTL1O95214 131 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 PPBPP02775 128 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 TRGV3P03979 118 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGLC3P0DOY3 106 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGHV4-38-2P0DP08 117 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 ARL3P36405 182 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 ZNF138P52744 262 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 NUTF2P61970 127 aaKnown RBP5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 TMEM78Q5T7P6 136 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 SAMD13Q5VXD3 122 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 PET117Q6UWS5 81 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 SPATA12Q7Z6I5 190 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 TMEM219Q86XT9 240 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 ORMDL3Q8N138 153 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 Q8TAT8 98 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 VGLL1Q99990 258 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 TMEM191AQ9H0A3 160 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 DOPEY1Q5JWR5 2465 aa5.39□□□□□ -1.55
SMARCAL1-212ENST00000486983 TRBV7-9A0A0J9YWB2 115 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 A0A1B0GV90 55 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 LINC01546A6NGU7 62 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 H3BUX3 64 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 ZNF80P51504 273 aaPredicted RBP5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 CFHR3Q02985 330 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 TM4SF20Q53R12 229 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 BRD3OSQ6XYD6 125 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 ZNF705AQ6ZN79 300 aaPredicted RBP5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 FA2HQ7L5A8 372 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 OR10AG1Q8NH19 301 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 MAP1LC3CQ9BXW4 147 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 ST20Q9HBF5 79 aa5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 MRPS16Q9Y3D3 137 aaKnown RBP5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 UTP20O75691 2785 aaKnown RBP5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 UBR5O95071 2799 aaPredicted RBP5.38□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGHV4-4A0A075B6R2 117 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGHV3-35A0A0C4DH35 117 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 OR4C46A6NHA9 309 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 PRAC2D3DTV9 90 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 SOCS3O14543 225 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 OVOL1O14753 267 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 HLA-DMBP28068 263 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 LINC01545Q5VT33 79 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 IL17RELQ6ZVW7 336 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 DEFB125Q8N687 156 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 PRELID3AQ96N28 172 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 TPPP3Q9BW30 176 aa5.37□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGHV3OR16-10A0A075B7F0 116 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGHV3OR16-8A0A075B7F1 116 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 TMSB15BA0A087X1C1 80 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 A0A096LNT2 108 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 TMEM213A2RRL7 107 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 D6R8Y8 96 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 K7EMT4 169 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 M0QZ24 198 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 SNAI2O43623 268 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 ORM1P02763 201 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 HNRNPA3P51991 378 aaKnown RBP5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 ERCC8Q13216 396 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 TWIST1Q15672 202 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 MRPL51Q4U2R6 128 aaKnown RBP5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 APRG1Q8IVJ8 170 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 AMN1Q8IY45 258 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 RNF182Q8N6D2 247 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 PRSS3P2Q8NHM4 247 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 DPF1Q92782 380 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 C16orf92Q96LL3 132 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 LINC00477Q96M19 166 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 AGPAT4-IT1Q9H0P7 198 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 MS4A6AQ9H2W1 248 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 SIGLEC8Q9NYZ4 499 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 NBASA2RRP1 2371 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms