RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 HSBP1L1C9JCN9 74 aa13.79□□□□□ -0.2
PDLIM7-207ENST00000486828 ARL3P36405 182 aa13.79□□□□□ -0.2
PDLIM7-207ENST00000486828 SPG11Q96JI7 2443 aa13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 LINC01545Q5VT33 79 aa13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 TIMM8BQ9Y5J9 83 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 LOC389332A0A1B0GUA5 103 aa13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 A6NDX4 124 aa13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 BRI3O95415 125 aa13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 ZNF25P17030 456 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 HIST1H1AQ02539 215 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 FAM106AQ4KMX7 169 aa13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 TMEM78Q5T7P6 136 aa13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 GLMPQ8WWB7 406 aa13.78□□□□□ -0.2
PDLIM7-207ENST00000486828 A0A096LNJ9 63 aa13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 hDV102S1A0JD36 115 aa13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 H3BUA1 57 aa13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 IGHG2P01859 326 aa13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 G0S2P27469 103 aa13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 CKS2P33552 79 aa13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 LOXL1Q08397 574 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 LY6EQ16553 131 aa13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 C9orf47Q6ZRZ4 202 aa13.77□□□□□ -0.21
PDLIM7-207ENST00000486828 H3BUX3 64 aa13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 MSMBP08118 114 aa13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 PPIFP30405 207 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 NBPF19A0A087WUL8 3843 aa13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 H0Y8G0 127 aa13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 NDUFA4O00483 81 aa13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 COX6B1P14854 86 aa13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 RNF185Q96GF1 192 aa13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 MSRB1Q9NZV6 116 aa13.76□□□□□ -0.21
PDLIM7-207ENST00000486828 ABCA12Q86UK0 2595 aa13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 IGKV3D-20A0A0C4DH25 116 aa13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 SMKR1H3BMG3 65 aa13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 NPYP01303 97 aa13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 C9orf139Q6ZV77 190 aa13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 STPG4Q8N801 248 aa13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 USMG5Q96IX5 58 aa13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 MCRIP2Q9BUT9 160 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-207ENST00000486828 TRBV12-3P01733 135 aa13.74□□□□□ -0.21
PDLIM7-207ENST00000486828 TFPI2P48307 235 aa13.74□□□□□ -0.21
PDLIM7-207ENST00000486828 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
PDLIM7-207ENST00000486828 C11orf21Q9P2W6 132 aa13.74□□□□□ -0.21
PDLIM7-207ENST00000486828 PPBPP02775 128 aa13.74□□□□□ -0.21
PDLIM7-207ENST00000486828 UNQ9165/PRO28630Q6UXU0 137 aa13.74□□□□□ -0.21
PDLIM7-207ENST00000486828 MS4A6AQ9H2W1 248 aa13.74□□□□□ -0.21
PDLIM7-207ENST00000486828 BAHCC1Q9P281 2608 aa13.73□□□□□ -0.21
PDLIM7-207ENST00000486828 HECTD1Q9ULT8 2610 aa13.73□□□□□ -0.21
PDLIM7-207ENST00000486828 NCR2O95944 276 aa13.73□□□□□ -0.21
PDLIM7-207ENST00000486828 SVEP1Q4LDE5 3571 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 SMAD7O15105 426 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 HINT1P49773 126 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 PMCHL2Q9BQD1 86 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 SCRT2Q9NQ03 307 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 FBN2P35556 2912 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 DLEU1O43261 78 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 TCF21O43680 179 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 HBDP02042 147 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 GAGE1Q13065 139 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 HIST2H2BCQ6DN03 193 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 PRSS57Q6UWY2 283 aa13.72□□□□□ -0.21
PDLIM7-207ENST00000486828 ASH1LQ9NR48 2969 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-207ENST00000486828 SLC25A34Q6PIV7 304 aa13.71□□□□□ -0.21
PDLIM7-207ENST00000486828 C20orf173Q96LM9 149 aa13.71□□□□□ -0.21
PDLIM7-207ENST00000486828 LENEPQ9Y5L5 61 aa13.71□□□□□ -0.21
PDLIM7-207ENST00000486828 POLQO75417 2590 aa13.71□□□□□ -0.22
PDLIM7-207ENST00000486828 B4DSR2 109 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 PF4V1P10720 104 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 BLCAPP62952 87 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 GPHB5Q86YW7 130 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 OR8A1Q8NGG7 326 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 MAP1LC3AQ9H492 121 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 IGHV7-4-1A0A0J9YVY3 117 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 IGHV3-11P01762 117 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 FOXE3Q13461 319 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 ZNF738Q8NE65 137 aa13.7□□□□□ -0.22
PDLIM7-207ENST00000486828 LINC01546A6NGU7 62 aa13.69□□□□□ -0.22
PDLIM7-207ENST00000486828 SOCS3O14543 225 aa13.69□□□□□ -0.22
PDLIM7-207ENST00000486828 DSCR9P59020 149 aa13.69□□□□□ -0.22
PDLIM7-207ENST00000486828 NPFFR1Q9GZQ6 430 aa13.69□□□□□ -0.22
PDLIM7-207ENST00000486828 TP73-AS1Q9UF72 201 aa13.69□□□□□ -0.22
PDLIM7-207ENST00000486828 AVPP01185 164 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 LGALS9BQ3B8N2 356 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 LGALS9CQ6DKI2 356 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 Q6ZS46 218 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 OR4X2Q8NGF9 303 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 UNC79Q9P2D8 2635 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 GAS8-AS1O95177 125 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 TNFRSF6BO95407 300 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 FXYD7P58549 80 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 LINC00477Q96M19 166 aa13.68□□□□□ -0.22
PDLIM7-207ENST00000486828 A0A0G2JLM5 398 aa13.67□□□□□ -0.22
PDLIM7-207ENST00000486828 OVOL1O14753 267 aa13.67□□□□□ -0.22
PDLIM7-207ENST00000486828 GATA3P23771 443 aa13.67□□□□□ -0.22
PDLIM7-207ENST00000486828 PRR9Q5T870 116 aa13.67□□□□□ -0.22
PDLIM7-207ENST00000486828 GOLT1BQ9Y3E0 138 aa13.67□□□□□ -0.22
PDLIM7-207ENST00000486828 APCP25054 2843 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms