RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 DEFB136Q30KP8 78 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 FAM162BQ5T6X4 162 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 NUP35Q8NFH5 326 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BHQ93079 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 C20orf173Q96LM9 149 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BNQ99877 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 HIST1H2BMQ99879 126 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 AGPAT4-IT1Q9H0P7 198 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 LENEPQ9Y5L5 61 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 IGKV3-7A0A075B6H7 116 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 C5orf52A6NGY3 159 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 OR10J6PQ8NGY7 276 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 DCANP1Q8TF63 244 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 LINC00477Q96M19 166 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 SAV1Q9H4B6 383 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-204ENST00000486319 XKRY2A2RUG3 117 aa10.98□□□□□ -0.65
POLR2J3-204ENST00000486319 SPINK4O60575 86 aa10.98□□□□□ -0.65
POLR2J3-204ENST00000486319 ATP5L2Q7Z4Y8 100 aa10.98□□□□□ -0.65
POLR2J3-204ENST00000486319 GPR61Q9BZJ8 451 aa10.98□□□□□ -0.65
POLR2J3-204ENST00000486319 FABP5P3A8MUU1 101 aa10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 SNURFLB1AK76 121 aa10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 SH2D1AO60880 128 aa10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 FOXA3P55318 350 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 NDUFA6P56556 154 aa10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 RBPMS2Q6ZRY4 209 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 MS4A6AQ9H2W1 248 aa10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 CMYA5Q8N3K9 4069 aa10.97□□□□□ -0.65
POLR2J3-204ENST00000486319 TMEM189A5PLL7 270 aa10.96□□□□□ -0.65
POLR2J3-204ENST00000486319 RPS20P60866 119 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-204ENST00000486319 PAFAH1B2P68402 229 aa10.96□□□□□ -0.65
POLR2J3-204ENST00000486319 Q6AWC8 147 aa10.96□□□□□ -0.65
POLR2J3-204ENST00000486319 GTSF1Q8WW33 167 aa10.96□□□□□ -0.65
POLR2J3-204ENST00000486319 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-204ENST00000486319 UBE2CO00762 179 aa10.95□□□□□ -0.66
POLR2J3-204ENST00000486319 HLA-DQA1P01909 254 aa10.95□□□□□ -0.66
POLR2J3-204ENST00000486319 PF4P02776 101 aa10.95□□□□□ -0.66
POLR2J3-204ENST00000486319 TMEM136Q6ZRR5 245 aa10.95□□□□□ -0.66
POLR2J3-204ENST00000486319 WFDC3Q8IUB2 231 aa10.95□□□□□ -0.66
POLR2J3-204ENST00000486319 OR8A1Q8NGG7 326 aa10.95□□□□□ -0.66
POLR2J3-204ENST00000486319 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-204ENST00000486319 TRBV7-9A0A0J9YWB2 115 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 K7EQG2 157 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 ZNF80P51504 273 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 SNRPD3P62318 126 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 DEFA6Q01524 100 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 FHL3Q13643 280 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 PGLYRP4Q96LB8 373 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 DUX3Q96PT4 197 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 SELENOKQ9Y6D0 94 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 FRMD6-AS1P0C7T7 363 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 GZMBP10144 247 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 CD33P20138 364 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 RAB4BP61018 213 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 HIST1H1AQ02539 215 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 ADAMTSL5Q6ZMM2 481 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 RAX2Q96IS3 184 aa10.94□□□□□ -0.66
POLR2J3-204ENST00000486319 TRAV2A0A0B4J234 112 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 A0A1B0GXF2 115 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 G3V4G9 280 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 CCL24O00175 119 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 CSN3P07498 182 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 ZNF705DP0CH99 300 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 ZNF705BP0CI00 300 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 HOXA5P20719 270 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 TFPI2P48307 235 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 HBBP68871 147 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 BORCS7Q96B45 105 aa10.93□□□□□ -0.66
POLR2J3-204ENST00000486319 MEGF8Q7Z7M0 2845 aa10.92□□□□□ -0.66
POLR2J3-204ENST00000486319 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
POLR2J3-204ENST00000486319 WFDC9Q8NEX5 89 aa10.92□□□□□ -0.66
POLR2J3-204ENST00000486319 A0A1B0GUT8 65 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 A0A1B0GW15 77 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 ORM1P02763 201 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 S100A8P05109 93 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 ZNF688P0C7X2 276 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 RIGQ13278 110 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 OXLD1Q5BKU9 147 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 FAM19A4Q96LR4 140 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
POLR2J3-204ENST00000486319 NOTCH3Q9UM47 2321 aa10.9□□□□□ -0.66
POLR2J3-204ENST00000486319 TMSB15BA0A087X1C1 80 aa10.9□□□□□ -0.66
POLR2J3-204ENST00000486319 F6UB75 175 aa10.9□□□□□ -0.66
POLR2J3-204ENST00000486319 APCSP02743 223 aa10.9□□□□□ -0.66
POLR2J3-204ENST00000486319 CAMPP49913 170 aa10.9□□□□□ -0.66
POLR2J3-204ENST00000486319 PSMG4Q5JS54 123 aa10.9□□□□□ -0.66
POLR2J3-204ENST00000486319 COA6Q5JTJ3 125 aaKnown RBP10.9□□□□□ -0.66
POLR2J3-204ENST00000486319 SAMD5Q5TGI4 173 aa10.9□□□□□ -0.66
POLR2J3-204ENST00000486319 CRISP2P16562 243 aa10.89□□□□□ -0.67
POLR2J3-204ENST00000486319 DEFB1P60022 68 aa10.89□□□□□ -0.67
POLR2J3-204ENST00000486319 EBLN2Q6P2I7 272 aa10.89□□□□□ -0.67
POLR2J3-204ENST00000486319 APRG1Q8IVJ8 170 aa10.89□□□□□ -0.67
POLR2J3-204ENST00000486319 TRAV21A0A0B4J279 112 aa10.89□□□□□ -0.67
POLR2J3-204ENST00000486319 GPX1P07203 203 aa10.89□□□□□ -0.67
POLR2J3-204ENST00000486319 IGLL1P15814 213 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms