RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
MCF2L-226ENST00000486210 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 LOC102723971A0A1B0GUV8 181 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 SCO2A0A1W2PP80 73 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 J3KRW8 73 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 IFNA1P01562 189 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 IGLV2-11P01706 119 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 MED14OSP0DP75 135 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 ZNF138P52744 262 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 NUTF2P61970 127 aaKnown RBP12.66□□□□□ -0.38
MCF2L-226ENST00000486210 LINC00336Q6ZUF6 198 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 CYB561D1Q8N8Q1 229 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 CSNK1G2-AS1Q8NCQ2 148 aa12.66□□□□□ -0.38
MCF2L-226ENST00000486210 SERTM2A0A1B0GWG4 89 aa12.65□□□□□ -0.38
MCF2L-226ENST00000486210 IGLL5B9A064 214 aa12.65□□□□□ -0.38
MCF2L-226ENST00000486210 ZNF767PQ75MW2 155 aa12.65□□□□□ -0.38
MCF2L-226ENST00000486210 Q8NAQ8 132 aa12.65□□□□□ -0.38
MCF2L-226ENST00000486210 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
MCF2L-226ENST00000486210 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
MCF2L-226ENST00000486210 ODF3Q96PU9 254 aa12.65□□□□□ -0.38
MCF2L-226ENST00000486210 VAX2Q9UIW0 290 aa12.65□□□□□ -0.38
MCF2L-226ENST00000486210 IGHV4-28A0A0C4DH34 117 aa12.64□□□□□ -0.39
MCF2L-226ENST00000486210 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
MCF2L-226ENST00000486210 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
MCF2L-226ENST00000486210 CDKN1BP46527 198 aa12.64□□□□□ -0.39
MCF2L-226ENST00000486210 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
MCF2L-226ENST00000486210 PRR9Q5T870 116 aa12.64□□□□□ -0.39
MCF2L-226ENST00000486210 ZFAND2AQ8N6M9 145 aa12.64□□□□□ -0.39
MCF2L-226ENST00000486210 TMEM75Q8N9X5 138 aa12.64□□□□□ -0.39
MCF2L-226ENST00000486210 PSG8Q9UQ74 426 aa12.64□□□□□ -0.39
MCF2L-226ENST00000486210 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
MCF2L-226ENST00000486210 LEPP41159 167 aa12.63□□□□□ -0.39
MCF2L-226ENST00000486210 MEF2BQ02080 365 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-226ENST00000486210 ZNF506Q5JVG8 444 aa12.63□□□□□ -0.39
MCF2L-226ENST00000486210 PRNTQ86SH4 94 aa12.63□□□□□ -0.39
MCF2L-226ENST00000486210 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
MCF2L-226ENST00000486210 TCEAL7Q9BRU2 100 aa12.63□□□□□ -0.39
MCF2L-226ENST00000486210 C1QTNF4Q9BXJ3 329 aa12.63□□□□□ -0.39
MCF2L-226ENST00000486210 KRTAP4-5Q9BYR2 181 aa12.63□□□□□ -0.39
MCF2L-226ENST00000486210 TRAV10A0A0B4J240 114 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 F6UZH7 168 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 K7EQM0 130 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 AMBPP02760 352 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 CRISP2P16562 243 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 AKR1C3P42330 323 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-226ENST00000486210 BTN1A1Q13410 526 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 TOR2AQ5JU69 321 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 GFI1BQ5VTD9 330 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 IGF2BP2-AS1Q96M15 143 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 FAM210AQ96ND0 272 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
MCF2L-226ENST00000486210 KLLNB2CW77 178 aa12.61□□□□□ -0.39
MCF2L-226ENST00000486210 TSPOP30536 169 aa12.61□□□□□ -0.39
MCF2L-226ENST00000486210 TAGLN2P37802 199 aaKnown RBP12.61□□□□□ -0.39
MCF2L-226ENST00000486210 Q6ZQT7 251 aa12.61□□□□□ -0.39
MCF2L-226ENST00000486210 C11orf52Q96A22 123 aa12.61□□□□□ -0.39
MCF2L-226ENST00000486210 C8orf49Q96NF6 230 aa12.61□□□□□ -0.39
MCF2L-226ENST00000486210 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
MCF2L-226ENST00000486210 INSP01308 110 aa12.6□□□□□ -0.39
MCF2L-226ENST00000486210 RNASE4P34096 147 aaKnown RBP12.6□□□□□ -0.39
MCF2L-226ENST00000486210 RAB14P61106 215 aa12.6□□□□□ -0.39
MCF2L-226ENST00000486210 CLLU1Q5K131 121 aa12.6□□□□□ -0.39
MCF2L-226ENST00000486210 Q86TA4 180 aa12.6□□□□□ -0.39
MCF2L-226ENST00000486210 DERL1Q9BUN8 251 aa12.6□□□□□ -0.39
MCF2L-226ENST00000486210 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
MCF2L-226ENST00000486210 IGHV3OR16-12A0A075B7B8 117 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 TRBV7-9A0A0J9YWB2 115 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 C7orf71A4D174 169 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 PRM2P04554 102 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 GPX1P07203 203 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 SRSF3P84103 164 aaKnown RBP12.59□□□□□ -0.39
MCF2L-226ENST00000486210 TMEM183BQ1AE95 376 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 FMC1Q96HJ9 113 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 EIF5A2Q9GZV4 153 aaKnown RBP12.59□□□□□ -0.39
MCF2L-226ENST00000486210 TREM1Q9NP99 234 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 X6R8D5 127 aa12.59□□□□□ -0.39
MCF2L-226ENST00000486210 TRBV6-1A0A0K0K1D8 114 aa12.58□□□□□ -0.4
MCF2L-226ENST00000486210 RTL8CO15255 209 aa12.58□□□□□ -0.4
MCF2L-226ENST00000486210 PDE6DO43924 150 aa12.58□□□□□ -0.4
MCF2L-226ENST00000486210 UBE2G1P62253 170 aa12.58□□□□□ -0.4
MCF2L-226ENST00000486210 ZNF705AQ6ZN79 300 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-226ENST00000486210 Q6ZTC4 211 aa12.58□□□□□ -0.4
MCF2L-226ENST00000486210 MED9Q9NWA0 146 aa12.58□□□□□ -0.4
MCF2L-226ENST00000486210 HSPG2P98160 4391 aa12.58□□□□□ -0.4
MCF2L-226ENST00000486210 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
MCF2L-226ENST00000486210 RAB19A4D1S5 217 aa12.57□□□□□ -0.4
MCF2L-226ENST00000486210 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
MCF2L-226ENST00000486210 PRSS29PA6NIE9 313 aa12.57□□□□□ -0.4
MCF2L-226ENST00000486210 C9JQL5 133 aa12.57□□□□□ -0.4
MCF2L-226ENST00000486210 RGS13O14921 159 aa12.57□□□□□ -0.4
MCF2L-226ENST00000486210 ZNF324O75467 553 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-226ENST00000486210 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
MCF2L-226ENST00000486210 ZNF80P51504 273 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-226ENST00000486210 GOLT1BQ9Y3E0 138 aa12.57□□□□□ -0.4
MCF2L-226ENST00000486210 LTAP01374 205 aa12.56□□□□□ -0.4
MCF2L-226ENST00000486210 SRP19P09132 144 aaKnown RBP12.56□□□□□ -0.4
MCF2L-226ENST00000486210 LINC01587Q99440 93 aa12.56□□□□□ -0.4
MCF2L-226ENST00000486210 NDFIP1Q9BT67 221 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms