RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 C5orf17Q8NAS9 161 aa7.07□□□□□ -1.28
SND1-213ENST00000486037 ZNF331Q9NQX6 463 aaPredicted RBP7.07□□□□□ -1.28
SND1-213ENST00000486037 EPDR1Q9UM22 224 aa7.07□□□□□ -1.28
SND1-213ENST00000486037 RPH3ALQ9UNE2 315 aa7.07□□□□□ -1.28
SND1-213ENST00000486037 TRBV20OR9-2A0A075B6H5 130 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 IGKV3-7A0A075B6H7 116 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 TCRAP04437 139 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 MEOX2P50222 304 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 APRG1Q8IVJ8 170 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 RNF182Q8N6D2 247 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 HIST1H2BAQ96A08 127 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 LINC00479Q96M42 142 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 TCEAL7Q9BRU2 100 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 SLC50A1Q9BRV3 221 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 AAMDCQ9H7C9 122 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 NRN1Q9NPD7 142 aa7.06□□□□□ -1.28
SND1-213ENST00000486037 TRAV34A0A0B4J273 112 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 ZNF705FA8MVS1 300 aaPredicted RBP7.05□□□□□ -1.28
SND1-213ENST00000486037 DIRC3C9JPN6 131 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 PRAC2D3DTV9 90 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 AKR1C3P42330 323 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 RPL35P42766 123 aaKnown RBP7.05□□□□□ -1.28
SND1-213ENST00000486037 RPL11P62913 178 aaKnown RBP7.05□□□□□ -1.28
SND1-213ENST00000486037 FAM74A3Q4VXF1 159 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 ATRAIDQ6UW56 229 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 GBGT1Q8N5D6 347 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 Q8NAQ8 132 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 CMTM2Q8TAZ6 248 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 C16orf92Q96LL3 132 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 C20orf173Q96LM9 149 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 IGF2BP2-AS1Q96M15 143 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 ATG101Q9BSB4 218 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 SDF2L1Q9HCN8 221 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 KLF12Q9Y4X4 402 aa7.05□□□□□ -1.28
SND1-213ENST00000486037 AGRNO00468 2067 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 TRAV10A0A0B4J240 114 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 PGPEP1LA6NFU8 196 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 EPM2AB3EWF7 344 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 C9JCJ5 164 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 ISLRO14498 428 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 P0DMU3 169 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 FAM231AP0DMU4 169 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 FAM231CP0DMU5 169 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 CNN1P51911 297 aaKnown RBP7.04□□□□□ -1.28
SND1-213ENST00000486037 RPL23P62829 140 aaKnown RBP7.04□□□□□ -1.28
SND1-213ENST00000486037 PSG3Q16557 428 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 TMEM183BQ1AE95 376 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 TMEM241Q24JQ0 296 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 CENPWQ5EE01 88 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 RBPMS2Q6ZRY4 209 aaKnown RBP7.04□□□□□ -1.28
SND1-213ENST00000486037 GOLT1AQ6ZVE7 132 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 CLRN3Q8NCR9 226 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 DCANP1Q8TF63 244 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 TVP23CQ96ET8 276 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 SGK494Q96LW2 274 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 NIPSNAP3BQ9BS92 247 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 CSTL1Q9H114 145 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 NAT8Q9UHE5 227 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 PRELID1Q9Y255 219 aa7.04□□□□□ -1.28
SND1-213ENST00000486037 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 IGKV2-40A0A087WW87 121 aaPredicted RBP7.03□□□□□ -1.28
SND1-213ENST00000486037 TRAV8-1A0A0A6YYK1 113 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 TRAV25A0A0B4J276 109 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 K7EQG2 157 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 IGKV2D-40P01614 121 aaPredicted RBP7.03□□□□□ -1.28
SND1-213ENST00000486037 IGLV2-11P01706 119 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 IGLV2-8P01709 118 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 AMBPP02760 352 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 TFPI2P48307 235 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 TAS2R60P59551 318 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 C1orf134Q5TEV5 83 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 SVBPQ8N300 66 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 FAM24BQ8N5W8 94 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 ARL6IP6Q8N6S5 226 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 OCC1Q8TAD7 63 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 MRPL53Q96EL3 112 aaKnown RBP7.03□□□□□ -1.28
SND1-213ENST00000486037 NACAE9PAV3 2078 aa7.03□□□□□ -1.28
SND1-213ENST00000486037 IGHV4-28A0A0C4DH34 117 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 TRBV6-1A0A0K0K1D8 114 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 K7EN84 100 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 M0R036 132 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 SCO1O75880 301 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 CSN1S1P47710 185 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 DEFB1P60022 68 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 ADIRFQ15847 76 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 Q86TA4 180 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 LINC01551Q86U37 167 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 FMC1Q96HJ9 113 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 SPAG8Q99932 426 aaPredicted RBP7.02□□□□□ -1.29
SND1-213ENST00000486037 CLEC5AQ9NY25 188 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 CELA1Q9UNI1 258 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 PSG8Q9UQ74 426 aa7.02□□□□□ -1.29
SND1-213ENST00000486037 SERTM2A0A1B0GWG4 89 aa7.01□□□□□ -1.29
SND1-213ENST00000486037 C7orf77A4D0Y5 90 aa7.01□□□□□ -1.29
SND1-213ENST00000486037 DNASE2O00115 360 aaPredicted RBP7.01□□□□□ -1.29
SND1-213ENST00000486037 TSPAN4O14817 238 aa7.01□□□□□ -1.29
SND1-213ENST00000486037 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms