RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 RGS13O14921 159 aa14.4□□□□□ -0.1
LMBR1-217ENST00000485985 EIF3GO75821 320 aaKnown RBP eCLIP14.4□□□□□ -0.1
LMBR1-217ENST00000485985 PET100P0DJ07 73 aa14.4□□□□□ -0.1
LMBR1-217ENST00000485985 RANP62826 216 aaKnown RBP14.4□□□□□ -0.1
LMBR1-217ENST00000485985 MRPS16Q9Y3D3 137 aaKnown RBP14.4□□□□□ -0.1
LMBR1-217ENST00000485985 IGHV1OR15-1A0A075B7D0 117 aa14.39□□□□□ -0.11
LMBR1-217ENST00000485985 A0A096LPF7 62 aa14.39□□□□□ -0.11
LMBR1-217ENST00000485985 RPL12P30050 165 aaKnown RBP14.39□□□□□ -0.11
LMBR1-217ENST00000485985 DEFA1P59665 94 aa14.39□□□□□ -0.11
LMBR1-217ENST00000485985 DEFA3P59666 94 aa14.39□□□□□ -0.11
LMBR1-217ENST00000485985 Q8N1X5 172 aa14.39□□□□□ -0.11
LMBR1-217ENST00000485985 WFDC1Q9HC57 220 aa14.39□□□□□ -0.11
LMBR1-217ENST00000485985 MRPL16Q9NX20 251 aaKnown RBP14.39□□□□□ -0.11
LMBR1-217ENST00000485985 TRBV7-9A0A0J9YWB2 115 aa14.38□□□□□ -0.11
LMBR1-217ENST00000485985 RBAKDNA6NC62 111 aa14.38□□□□□ -0.11
LMBR1-217ENST00000485985 KHDC3LQ587J8 217 aa14.38□□□□□ -0.11
LMBR1-217ENST00000485985 SPATA12Q7Z6I5 190 aa14.37□□□□□ -0.11
LMBR1-217ENST00000485985 LYPD1Q8N2G4 141 aa14.37□□□□□ -0.11
LMBR1-217ENST00000485985 ST6GAL2Q96JF0 529 aa14.37□□□□□ -0.11
LMBR1-217ENST00000485985 IFNA5P01569 189 aa14.36□□□□□ -0.11
LMBR1-217ENST00000485985 IGHV3-53P01767 116 aa14.36□□□□□ -0.11
LMBR1-217ENST00000485985 CSN1S1P47710 185 aa14.36□□□□□ -0.11
LMBR1-217ENST00000485985 ZNF266Q14584 549 aa14.36□□□□□ -0.11
LMBR1-217ENST00000485985 TTC32Q5I0X7 151 aa14.36□□□□□ -0.11
LMBR1-217ENST00000485985 MUC21Q5SSG8 566 aa14.36□□□□□ -0.11
LMBR1-217ENST00000485985 SCGB1C1Q8TD33 95 aa14.36□□□□□ -0.11
LMBR1-217ENST00000485985 ARPC5LQ9BPX5 153 aa14.36□□□□□ -0.11
LMBR1-217ENST00000485985 DIRC3C9JPN6 131 aa14.35□□□□□ -0.11
LMBR1-217ENST00000485985 TAS2R45P59539 299 aa14.34□□□□□ -0.11
LMBR1-217ENST00000485985 ZNF415Q09FC8 603 aa14.34□□□□□ -0.11
LMBR1-217ENST00000485985 SCRT2Q9NQ03 307 aa14.34□□□□□ -0.11
LMBR1-217ENST00000485985 RAB2AP61019 212 aa14.33□□□□□ -0.12
LMBR1-217ENST00000485985 Q6AWC8 147 aa14.33□□□□□ -0.12
LMBR1-217ENST00000485985 HYLS1Q96M11 299 aa14.33□□□□□ -0.12
LMBR1-217ENST00000485985 MDFICQ9P1T7 246 aa14.33□□□□□ -0.12
LMBR1-217ENST00000485985 APOBP04114 4563 aaKnown RBP14.32□□□□□ -0.12
LMBR1-217ENST00000485985 A0A1W2PPQ1 181 aa14.32□□□□□ -0.12
LMBR1-217ENST00000485985 OTORQ9NRC9 128 aa14.32□□□□□ -0.12
LMBR1-217ENST00000485985 RPH3ALQ9UNE2 315 aa14.32□□□□□ -0.12
LMBR1-217ENST00000485985 ALG5Q9Y673 324 aa14.32□□□□□ -0.12
LMBR1-217ENST00000485985 PAX4O43316 350 aa14.31□□□□□ -0.12
LMBR1-217ENST00000485985 FHL2Q14192 279 aa14.31□□□□□ -0.12
LMBR1-217ENST00000485985 LENEPQ9Y5L5 61 aa14.31□□□□□ -0.12
LMBR1-217ENST00000485985 ICOSQ9Y6W8 199 aa14.31□□□□□ -0.12
LMBR1-217ENST00000485985 CRYBA4P53673 196 aa14.3□□□□□ -0.12
LMBR1-217ENST00000485985 TMEM183BQ1AE95 376 aa14.3□□□□□ -0.12
LMBR1-217ENST00000485985 ACOT6Q3I5F7 207 aaPredicted RBP14.3□□□□□ -0.12
LMBR1-217ENST00000485985 TMEM183AQ8IXX5 376 aa14.3□□□□□ -0.12
LMBR1-217ENST00000485985 TMED6Q8WW62 240 aa14.3□□□□□ -0.12
LMBR1-217ENST00000485985 C8orf49Q96NF6 230 aa14.3□□□□□ -0.12
LMBR1-217ENST00000485985 PRO0255Q9UI72 69 aa14.3□□□□□ -0.12
LMBR1-217ENST00000485985 PGPA6NDG6 321 aa14.29□□□□□ -0.12
LMBR1-217ENST00000485985 HMGB3O15347 200 aaKnown RBP14.29□□□□□ -0.12
LMBR1-217ENST00000485985 SFTA3P0C7M3 94 aa14.29□□□□□ -0.12
LMBR1-217ENST00000485985 KRTAP10-2P60368 255 aa14.29□□□□□ -0.12
LMBR1-217ENST00000485985 PQLC2Q6ZP29 291 aa14.29□□□□□ -0.12
LMBR1-217ENST00000485985 DNAH5Q8TE73 4624 aa14.29□□□□□ -0.12
LMBR1-217ENST00000485985 TRAV8-1A0A0A6YYK1 113 aa14.28□□□□□ -0.12
LMBR1-217ENST00000485985 BTF3P20290 206 aaKnown RBP14.28□□□□□ -0.12
LMBR1-217ENST00000485985 LINC00315P59091 139 aa14.28□□□□□ -0.12
LMBR1-217ENST00000485985 GOLT1AQ6ZVE7 132 aa14.28□□□□□ -0.12
LMBR1-217ENST00000485985 TVP23CQ96ET8 276 aa14.28□□□□□ -0.12
LMBR1-217ENST00000485985 HHLA3Q9XRX5 114 aa14.28□□□□□ -0.12
LMBR1-217ENST00000485985 A0A1W2PPV4 95 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 NXPH4O95158 308 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 GNG5P63218 68 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 FAM159AQ6UWV7 190 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 OR10G4Q8NGN3 311 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 OR10G9Q8NGN4 311 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 OR10G7Q8NGN6 311 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 CMTM2Q8TAZ6 248 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 ZNF479Q96JC4 524 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 NAGKQ9UJ70 344 aa14.27□□□□□ -0.13
LMBR1-217ENST00000485985 TRGV11A0A075B6L2 103 aa14.26□□□□□ -0.13
LMBR1-217ENST00000485985 F6UZH7 168 aa14.26□□□□□ -0.13
LMBR1-217ENST00000485985 SIVA1O15304 175 aa14.26□□□□□ -0.13
LMBR1-217ENST00000485985 ARL14EPLP0DKL9 152 aa14.26□□□□□ -0.13
LMBR1-217ENST00000485985 TDRG1Q3Y452 100 aa14.26□□□□□ -0.13
LMBR1-217ENST00000485985 Q6ZRN7 208 aaPredicted RBP14.26□□□□□ -0.13
LMBR1-217ENST00000485985 RASL10AQ92737 203 aa14.26□□□□□ -0.13
LMBR1-217ENST00000485985 FAM74A1Q5RGS3 127 aa14.25□□□□□ -0.13
LMBR1-217ENST00000485985 HSD17B11Q8NBQ5 300 aa14.25□□□□□ -0.13
LMBR1-217ENST00000485985 TRGV4A0A0C4DH28 118 aa14.24□□□□□ -0.13
LMBR1-217ENST00000485985 CDC34P49427 236 aaPredicted RBP14.24□□□□□ -0.13
LMBR1-217ENST00000485985 SLAQ13239 276 aa14.24□□□□□ -0.13
LMBR1-217ENST00000485985 MRPL23Q16540 153 aaKnown RBP14.24□□□□□ -0.13
LMBR1-217ENST00000485985 LYPD5Q6UWN5 251 aa14.24□□□□□ -0.13
LMBR1-217ENST00000485985 OR2G3Q8NGZ4 309 aa14.24□□□□□ -0.13
LMBR1-217ENST00000485985 SPXQ9BT56 116 aa14.24□□□□□ -0.13
LMBR1-217ENST00000485985 IGHV3-16A0A0C4DH30 117 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 K7EQD1 137 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 GNRH2O43555 120 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 STAG3L2P0CL84 134 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 STAG3L3P0CL85 134 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 IQCF2Q8IXL9 164 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 ARL6IP6Q8N6S5 226 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 AQP10Q96PS8 301 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 TREM1Q9NP99 234 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 BATF3Q9NR55 127 aa14.23□□□□□ -0.13
LMBR1-217ENST00000485985 PTTG1O95997 202 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms