RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 EIF4EBP1Q13541 118 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-205ENST00000485055 MUC21Q5SSG8 566 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 FER1L6-AS1Q8NA97 138 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 B9D2Q9BPU9 175 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 IFI27L2Q9H2X8 130 aa3.92□□□□□ -1.78
CCDC39-205ENST00000485055 WNK2Q9Y3S1 2297 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 JMJD1CQ15652 2540 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 IGHV3OR16-12A0A075B7B8 117 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 KLLNB2CW77 178 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 J3QR89 54 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 PDCD5O14737 125 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 HOXA5P20719 270 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 NTN5Q8WTR8 489 aaPredicted RBP3.91□□□□□ -1.78
CCDC39-205ENST00000485055 LINC00052Q96N35 136 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 TTTY10Q9BZA0 68 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 A6NIN4 97 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 M0R381 172 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 MYL12BO14950 172 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 CTSDP07339 412 aaPredicted RBP3.91□□□□□ -1.78
CCDC39-205ENST00000485055 TMEM14EPQ6UXP3 125 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 TRAPPC6BQ86SZ2 158 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 PDPNQ86YL7 162 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 DDB2Q92466 427 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 C11orf52Q96A22 123 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 S100A13Q99584 98 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 MRPL20Q9BYC9 149 aaKnown RBP3.91□□□□□ -1.78
CCDC39-205ENST00000485055 COMMD3Q9UBI1 195 aa3.91□□□□□ -1.78
CCDC39-205ENST00000485055 TRBV6-7A0A0A0MS04 114 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 A0A0B4J2A0 478 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 IGHV3OR16-9A0A0B4J2B5 98 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 TCRBV4S1A1TA0A5B7 111 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 C7orf71A4D174 169 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 LY6EQ16553 131 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 C9orf66Q5T8R8 295 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 ZNF664Q8N3J9 261 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 SHPKQ9UHJ6 478 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 COX11Q9Y6N1 276 aa3.9□□□□□ -1.78
CCDC39-205ENST00000485055 PRKDCP78527 4128 aaKnown RBP3.9□□□□□ -1.79
CCDC39-205ENST00000485055 TRAV5A0A0B4J249 113 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 GPX1P07203 203 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 BCL2P10415 239 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 PSMB3P49720 205 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 MRGPRG-AS1Q2M3A8 158 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 TRPT1Q86TN4 253 aaKnown RBP3.9□□□□□ -1.79
CCDC39-205ENST00000485055 OR4C16Q8NGL9 310 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 SLC25A21Q9BQT8 299 aaPredicted RBP3.9□□□□□ -1.79
CCDC39-205ENST00000485055 TMEM70Q9BUB7 260 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 GGTLC1Q9BX51 225 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 HILPDAQ9Y5L2 63 aa3.9□□□□□ -1.79
CCDC39-205ENST00000485055 H0YJW9 148 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 K7EQG2 157 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 NXPH4O95158 308 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 IGLV2-23P01705 113 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 IGLL1P15814 213 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 MP68P56378 58 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 CATR1Q13166 79 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 Q5BKY6 102 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 TMEM61Q8N0U2 210 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 ZNF645Q8N7E2 425 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 OR4C12Q96R67 309 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 TMEM243Q9BU79 118 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 ABRACLQ9P1F3 81 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 IGHV7-81A0A0B4J1V7 117 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 PNMA8CA0A1B0GUJ8 204 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 K7EIL1 84 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 PHOX2AO14813 284 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 IGKV1D-33P01593 117 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 IGKV1-33P01594 117 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 NDUFA6P56556 154 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 OR10G8Q8NGN5 311 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 OR4A5Q8NH83 315 aa3.89□□□□□ -1.79
CCDC39-205ENST00000485055 PGPA6NDG6 321 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 PROP1O75360 226 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 DPM2O94777 84 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 PSMB2P49721 201 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 KRTAP10-11P60412 298 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 TEX43Q6ZNM6 134 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 FRZBQ92765 325 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 WWC2-AS2Q96NR7 200 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 SELENOIQ9C0D9 397 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 ZNF581Q9P0T4 197 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 LINC00527Q9UJ94 153 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 PYGO1Q9Y3Y4 419 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 F11RQ9Y624 299 aaKnown RBP3.88□□□□□ -1.79
CCDC39-205ENST00000485055 IGHV6-1A0A0B4J1U7 121 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 A8MUN3 132 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 HLA-DQB1P01920 261 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 LINC00313P59037 77 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 SRPXP78539 464 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 DIAPH2-AS1Q14236 149 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 ZNF429Q86V71 674 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 USMG5Q96IX5 58 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 HSPB1P04792 205 aaKnown RBP3.88□□□□□ -1.79
CCDC39-205ENST00000485055 SAA2P0DJI9 122 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-205ENST00000485055 KIAA0087Q14695 138 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 GUCA2BQ16661 112 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 RTL8BQ17RB0 113 aa3.88□□□□□ -1.79
CCDC39-205ENST00000485055 DCANP1Q8TF63 244 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms