RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 IGLV3-32A0A0A0MS00 114 aa1.65□□□□□ -2.15
VPS13A-211ENST00000484581 CKS2P33552 79 aa1.65□□□□□ -2.15
VPS13A-211ENST00000484581 DNAJB13P59910 316 aa1.65□□□□□ -2.15
VPS13A-211ENST00000484581 CCDC58Q4VC31 144 aa1.65□□□□□ -2.15
VPS13A-211ENST00000484581 LINC00322Q6ZN03 302 aaPredicted RBP1.65□□□□□ -2.15
VPS13A-211ENST00000484581 MMGT1Q8N4V1 131 aa1.65□□□□□ -2.15
VPS13A-211ENST00000484581 OR8J3Q8NGG0 315 aa1.65□□□□□ -2.15
VPS13A-211ENST00000484581 MRPL57Q9BQC6 102 aaKnown RBP1.65□□□□□ -2.15
VPS13A-211ENST00000484581 METTL1Q9UBP6 276 aaKnown RBP1.65□□□□□ -2.15
VPS13A-211ENST00000484581 PAIP2BQ9ULR5 123 aaKnown RBP1.65□□□□□ -2.15
VPS13A-211ENST00000484581 OVOS2A0A0J9YW53 1432 aa1.65□□□□□ -2.15
VPS13A-211ENST00000484581 OVOS2Q6IE36 1432 aa1.65□□□□□ -2.15
VPS13A-211ENST00000484581 TECTAO75443 2155 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 NCOA6Q14686 2063 aaPredicted RBP1.64□□□□□ -2.15
VPS13A-211ENST00000484581 LOC107984156A0A0G2JMH3 177 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 PNMA8CA0A1B0GUJ8 204 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 IFITM5A6NNB3 132 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 M0R2Z0 102 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 CD14P08571 375 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 PCBD1P61457 104 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 SPRNQ5BIV9 151 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 GLYATL3Q5SZD4 288 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 IZUMO2Q6UXV1 221 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 ARL17AQ8IVW1 177 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 C10orf111Q8N326 155 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 OTOSQ8NHW6 89 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 PFDN5Q99471 154 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 SMIM3Q9BZL3 60 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 DNAJC15Q9Y5T4 150 aa1.64□□□□□ -2.15
VPS13A-211ENST00000484581 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 J3QR89 54 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 DNAL4O96015 105 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 TSPAN19P0C672 248 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 IGLC6P0CF74 106 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 SNRPD3P62318 126 aaKnown RBP1.63□□□□□ -2.15
VPS13A-211ENST00000484581 C5orf17Q8NAS9 161 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 OBSCN-AS1Q96MR7 158 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 SMIM7Q9BQ49 75 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 TPT1P8Q9HAU6 139 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 COMMD3Q9UBI1 195 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 TNFSF18Q9UNG2 199 aa1.63□□□□□ -2.15
VPS13A-211ENST00000484581 PTPRDP23468 1912 aa1.62□□□□□ -2.15
VPS13A-211ENST00000484581 HELZP42694 1942 aaKnown RBP1.62□□□□□ -2.15
VPS13A-211ENST00000484581 IGHV1-24A0A0C4DH33 117 aa1.62□□□□□ -2.15
VPS13A-211ENST00000484581 SNRNP200O75643 2136 aaKnown RBP1.62□□□□□ -2.15
VPS13A-211ENST00000484581 KLF7O75840 302 aaPredicted RBP1.62□□□□□ -2.15
VPS13A-211ENST00000484581 CD3DP04234 171 aa1.62□□□□□ -2.15
VPS13A-211ENST00000484581 FAM107BQ9H098 131 aa1.62□□□□□ -2.15
VPS13A-211ENST00000484581 DISP2A7MBM2 1401 aa1.62□□□□□ -2.15
VPS13A-211ENST00000484581 SOGA1O94964 1423 aa1.62□□□□□ -2.15
VPS13A-211ENST00000484581 ARHGAP31Q2M1Z3 1444 aa1.62□□□□□ -2.15
VPS13A-211ENST00000484581 CACNA1BQ00975 2339 aa1.62□□□□□ -2.15
VPS13A-211ENST00000484581 KIAA1549LQ6ZVL6 1849 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 TRPM7Q96QT4 1865 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 FGD6Q6ZV73 1430 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 A0A0J9YY99 117 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 JMJD7-PLA2G4BH0Y9G9 81 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 NDUFA2O43678 99 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 EDF1O60869 148 aaKnown RBP1.61□□□□□ -2.15
VPS13A-211ENST00000484581 NEDD8Q15843 81 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 LINC00299Q6ZSB3 139 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 TCTEX1D1Q8N7M0 179 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 SLC35B3Q9H1N7 401 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 MYH13Q9UKX3 1938 aa1.61□□□□□ -2.15
VPS13A-211ENST00000484581 A6NN06 94 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 BBIP1A8MTZ0 92 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 YPEL1O60688 119 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 NCR2O95944 276 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 PPYP01298 95 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 LINC00694P0DN24 101 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 LYNX1P0DP58 116 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 KDELR1P24390 212 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 NCS1P62166 190 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 PLGLB1Q02325 96 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 Q6ZSA8 131 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 TSTD1Q8NFU3 115 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 OR10AC1Q8NH08 325 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 ANK1P16157 1881 aa1.6□□□□□ -2.15
VPS13A-211ENST00000484581 EML5Q05BV3 1969 aa1.59□□□□□ -2.15
VPS13A-211ENST00000484581 A0A1W2PPB8 328 aa1.59□□□□□ -2.15
VPS13A-211ENST00000484581 A0A1W2PRS3 328 aa1.59□□□□□ -2.15
VPS13A-211ENST00000484581 KIR3DP1A8MWS1 328 aa1.59□□□□□ -2.15
VPS13A-211ENST00000484581 SULT1C4O75897 302 aa1.59□□□□□ -2.15
VPS13A-211ENST00000484581 CTAGE3PQ8IX95 158 aa1.59□□□□□ -2.15
VPS13A-211ENST00000484581 PLPP5Q8NEB5 264 aa1.59□□□□□ -2.15
VPS13A-211ENST00000484581 DLG5Q8TDM6 1919 aa1.59□□□□□ -2.15
VPS13A-211ENST00000484581 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.59□□□□□ -2.16
VPS13A-211ENST00000484581 ZGRF1Q86YA3 2104 aa1.58□□□□□ -2.16
VPS13A-211ENST00000484581 ERBINQ96RT1 1412 aa1.58□□□□□ -2.16
VPS13A-211ENST00000484581 MYH6P13533 1939 aa1.58□□□□□ -2.16
VPS13A-211ENST00000484581 ANGP03950 147 aaKnown RBP1.58□□□□□ -2.16
VPS13A-211ENST00000484581 TSC22D3Q99576 134 aa1.58□□□□□ -2.16
VPS13A-211ENST00000484581 WFDC10AQ9H1F0 79 aa1.58□□□□□ -2.16
VPS13A-211ENST00000484581 CCDC171Q6TFL3 1326 aa1.58□□□□□ -2.16
VPS13A-211ENST00000484581 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
VPS13A-211ENST00000484581 TET1Q8NFU7 2136 aa1.57□□□□□ -2.16
VPS13A-211ENST00000484581 SYNJ1O43426 1573 aa1.57□□□□□ -2.16
VPS13A-211ENST00000484581 RBP4P02753 201 aa1.57□□□□□ -2.16
VPS13A-211ENST00000484581 CLLU1Q5K131 121 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms