RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 TRAV12-3A0A0B4J271 114 aa8.38□□□□□ -1.07
SNRNP200-206ENST00000484372 HMGB3O15347 200 aaKnown RBP8.38□□□□□ -1.07
SNRNP200-206ENST00000484372 NDUFB4O95168 129 aa8.38□□□□□ -1.07
SNRNP200-206ENST00000484372 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
SNRNP200-206ENST00000484372 ARL14EPLP0DKL9 152 aa8.38□□□□□ -1.07
SNRNP200-206ENST00000484372 CT45A10P0DMU9 189 aa8.38□□□□□ -1.07
SNRNP200-206ENST00000484372 MBD3L1Q8WWY6 194 aa8.38□□□□□ -1.07
SNRNP200-206ENST00000484372 LINC00477Q96M19 166 aa8.38□□□□□ -1.07
SNRNP200-206ENST00000484372 NBDYA0A0U1RRE5 68 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 GAGE12BA1L429 117 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 GAGE7O76087 117 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 CXorf1O96002 111 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 OR10J4P0C629 311 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 GAGE12FP0CL80 117 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 GAGE12GP0CL81 117 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 GAGE12IP0CL82 117 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 KIR3DS1Q14943 382 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 LYPD1Q8N2G4 141 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 ZNF680Q8NEM1 530 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 BLNKQ8WV28 456 aa8.37□□□□□ -1.07
SNRNP200-206ENST00000484372 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 C7orf71A4D174 169 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 GCHFRP30047 84 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 UBE2L3P68036 154 aaKnown RBP8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 DAZ2Q13117 558 aaKnown RBP8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 ZNRF2Q8NHG8 242 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 FAM213BQ8TBF2 198 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 RXFP4Q8TDU9 374 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 PKHD1P08F94 4074 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 NACAE9PAV3 2078 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 KIAA1109Q2LD37 5005 aa8.36□□□□□ -1.07
SNRNP200-206ENST00000484372 TRGV2A0A075B6R0 118 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 TRAV1-1A0A0B4J248 108 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 MAP1LC3B2A6NCE7 125 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 H3BNG1 76 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 M0R3E3 92 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 GPX1P07203 203 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 TTC32Q5I0X7 151 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 ALKAL2Q6UX46 152 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 LINC00612Q8N6U2 182 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 MAP1LC3BQ9GZQ8 125 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 TMEM167BQ9NRX6 74 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 LINC00588Q9Y4M8 146 aa8.35□□□□□ -1.07
SNRNP200-206ENST00000484372 A0A0J9YY99 117 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 NMBP08949 121 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 CSN1S1P47710 185 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 FGF8P55075 233 aaPredicted RBP8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 RANP62826 216 aaKnown RBP8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 ERCC8Q13216 396 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 ICAM4Q14773 271 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 FAM74A1Q5RGS3 127 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 TEX261Q6UWH6 196 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 EXOC3-AS1Q8N2X6 119 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 EIF4E3Q8N5X7 224 aaKnown RBP8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 SFT2D1Q8WV19 159 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 TMPRSS5Q9H3S3 457 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 Q9H8V8 135 aa8.34□□□□□ -1.07
SNRNP200-206ENST00000484372 A0A1W2PRE2 83 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 KLLNB2CW77 178 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 RGS13O14921 159 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 RNASE4P34096 147 aaKnown RBP8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 ANXA2RQ3ZCQ2 193 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 C9orf47Q6ZRZ4 202 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 ARL6IP6Q8N6S5 226 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 LINC00467Q9BRT7 94 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 AGPAT4-IT1Q9H0P7 198 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 Q9H3A6 140 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 OTORQ9NRC9 128 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 DNAH11Q96DT5 4516 aa8.33□□□□□ -1.08
SNRNP200-206ENST00000484372 TRGV1A0A0A0MS02 117 aa8.32□□□□□ -1.08
SNRNP200-206ENST00000484372 CRISP2P16562 243 aa8.32□□□□□ -1.08
SNRNP200-206ENST00000484372 Q6ZTI0 123 aa8.32□□□□□ -1.08
SNRNP200-206ENST00000484372 LYPD6BQ8NI32 183 aa8.32□□□□□ -1.08
SNRNP200-206ENST00000484372 GSN-AS1Q9NRJ2 163 aa8.32□□□□□ -1.08
SNRNP200-206ENST00000484372 ARL2-SNX15V9GYD0 113 aa8.32□□□□□ -1.08
SNRNP200-206ENST00000484372 TRBV7-9A0A0J9YWB2 115 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 PGPA6NDG6 321 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 TEX46H3BTG2 121 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 ZNF324O75467 553 aaPredicted RBP8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 HOXA5P20719 270 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 BLOC1S1P78537 153 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 BTN1A1Q13410 526 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 IBA57Q5T440 356 aaKnown RBP8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 FAM19A4Q96LR4 140 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 C18orf15Q96N68 181 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 KRTAP17-1Q9BYP8 105 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 NKX6-2Q9C056 277 aaPredicted RBP8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 ZNF492Q9P255 531 aa8.31□□□□□ -1.08
SNRNP200-206ENST00000484372 DYNC1H1Q14204 4646 aaKnown RBP8.3□□□□□ -1.08
SNRNP200-206ENST00000484372 IGKV2-40A0A087WW87 121 aaPredicted RBP8.3□□□□□ -1.08
SNRNP200-206ENST00000484372 A0A1W2PPQ1 181 aa8.3□□□□□ -1.08
SNRNP200-206ENST00000484372 FAM74A7A6NL05 159 aa8.3□□□□□ -1.08
SNRNP200-206ENST00000484372 C16orf90A8MZG2 172 aa8.3□□□□□ -1.08
SNRNP200-206ENST00000484372 IFNA7P01567 189 aa8.3□□□□□ -1.08
SNRNP200-206ENST00000484372 IGKV2D-40P01614 121 aaPredicted RBP8.3□□□□□ -1.08
SNRNP200-206ENST00000484372 BTF3P20290 206 aaKnown RBP8.3□□□□□ -1.08
SNRNP200-206ENST00000484372 PPT1P50897 306 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms