RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PARP14Q460N5 1801 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 ZFYVE26Q68DK2 2539 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 PIEZO1Q92508 2521 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 FAT4Q6V0I7 4981 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 LRP5O75197 1615 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 FGD6Q6ZV73 1430 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 TNCP24821 2201 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 TRBV7-6A0A0J9YX20 115 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 C3orf85A0A1B0GTC6 90 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 LOC107986453A0A1B0GWG9 222 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 ARL5CA6NH57 179 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 H7BYZ3 331 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 EVI2AP22794 236 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 RPS3P23396 243 aaKnown RBP eCLIP0.16□□□□□ -2.38
SCAF11-207ENST00000484275 S100A11P31949 105 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 QRFPP83859 136 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 SPINK13Q1W4C9 94 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 XAF1Q6GPH4 301 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 PPP1R2P3Q6NXS1 205 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 TCTEX1D1Q8N7M0 179 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 PLAC4Q8WY50 150 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 CARD19Q96LW7 228 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 FAM103A1Q9BTL3 118 aaKnown RBP0.16□□□□□ -2.38
SCAF11-207ENST00000484275 CCDC32Q9BV29 185 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 PCBD2Q9H0N5 130 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 C19orf12Q9NSK7 152 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 CACNA1EQ15878 2313 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 A2MP01023 1474 aa0.16□□□□□ -2.38
SCAF11-207ENST00000484275 ANKRD17O75179 2603 aaKnown RBP0.16□□□□□ -2.38
SCAF11-207ENST00000484275 DSPPQ9NZW4 1301 aa0.15□□□□□ -2.38
SCAF11-207ENST00000484275 CELSR2Q9HCU4 2923 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 TRBV27A0A0K0K1C4 114 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 A0A1B0GV72 72 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 PRORSD1PA6NEY8 169 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 IFITM5A6NNB3 132 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 BBIP1A8MTZ0 92 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 PGRMC1O00264 195 aaKnown RBP0.15□□□□□ -2.39
SCAF11-207ENST00000484275 IGF2P01344 180 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 GYPBP06028 91 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 GNG10P50151 68 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 DNAJB13P59910 316 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 C3orf62Q6ZUJ4 267 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 LINC00305Q7Z4B0 112 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 DEFB132Q7Z7B7 95 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.15□□□□□ -2.39
SCAF11-207ENST00000484275 MORN4Q8NDC4 146 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 TSKUQ8WUA8 353 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 LXNQ9BS40 222 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 MRPL35Q9NZE8 188 aaKnown RBP0.15□□□□□ -2.39
SCAF11-207ENST00000484275 MED31Q9Y3C7 131 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 MPC1Q9Y5U8 109 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 KDM6BO15054 1643 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 UNC13AQ9UPW8 1703 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 MYH13Q9UKX3 1938 aa0.15□□□□□ -2.39
SCAF11-207ENST00000484275 DSTQ03001 7570 aaKnown RBP0.14□□□□□ -2.39
SCAF11-207ENST00000484275 OTOGQ6ZRI0 2925 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 PTPRGP23470 1445 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 BLMP54132 1417 aaPredicted RBP0.14□□□□□ -2.39
SCAF11-207ENST00000484275 JMJD1CQ15652 2540 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.14□□□□□ -2.39
SCAF11-207ENST00000484275 TRAV13-1A0A0B4J241 112 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 A0A1W2PPB8 328 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 A0A1W2PRE2 83 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 A0A1W2PRS3 328 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 KIR3DP1A8MWS1 328 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 G0S2P27469 103 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 ETV6P41212 452 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 LSM3P62310 102 aaKnown RBP0.14□□□□□ -2.39
SCAF11-207ENST00000484275 SNRPD3P62318 126 aaKnown RBP0.14□□□□□ -2.39
SCAF11-207ENST00000484275 TFAMQ00059 246 aaKnown RBP0.14□□□□□ -2.39
SCAF11-207ENST00000484275 ASB16-AS1Q495Z4 193 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 GLYATL3Q5SZD4 288 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 TOMM20LQ6UXN7 152 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 OR8J3Q8NGG0 315 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 OR51A4Q8NGJ6 313 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 THEM6Q8WUY1 208 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 CENPHQ9H3R5 247 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 V9GYQ6 96 aa0.14□□□□□ -2.39
SCAF11-207ENST00000484275 SYNE1Q8NF91 8797 aaKnown RBP0.14□□□□□ -2.39
SCAF11-207ENST00000484275 SSPOA2VEC9 5147 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 LOC107984640A0A0U1RRK4 108 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 TMEM30CPA0ZSE6 113 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 EDF1O60869 148 aaKnown RBP0.13□□□□□ -2.39
SCAF11-207ENST00000484275 KRTAP2-3P0C7H8 128 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 CRYGSP22914 178 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 S100A5P33763 92 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 POLR2HP52434 150 aaKnown RBP0.13□□□□□ -2.39
SCAF11-207ENST00000484275 GTF2A1P52655 376 aaPredicted RBP0.13□□□□□ -2.39
SCAF11-207ENST00000484275 RPL37P61927 97 aaKnown RBP0.13□□□□□ -2.39
SCAF11-207ENST00000484275 FXYD3Q14802 87 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 TEX29Q8N6K0 151 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 TMEM229BQ8NBD8 167 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 OR5A2Q8NGI9 324 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 NAT14Q8WUY8 206 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 DMAC1Q96GE9 116 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 NABP2Q9BQ15 211 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 KRTAP2-4Q9BYR9 128 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 KRTAP2-1Q9BYU5 128 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 SMPXQ9UHP9 88 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms