RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TRAV23DV6A0A075B6W5 121 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 ATP5J2P56134 94 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 CECR9P0C854 216 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 CRYGSP22914 178 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 ZIC4Q8N9L1 334 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 C10orf105Q8TEF2 133 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 TM4SF4P48230 202 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 Q6ZS49 121 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 SS18Q15532 418 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 SLC25A29Q8N8R3 303 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 C11orf52Q96A22 123 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 RETNQ9HD89 108 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 ZDBF2Q9HCK1 2354 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 HTN3P15516 51 aa8.25□□□□□ -1.09
COL12A1-207ENST00000483888 LGALS9O00182 355 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 ITGBL1O95965 494 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-207ENST00000483888 CXCL10P02778 98 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 SMRP1Q8NCR6 262 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 ZNF71Q9NQZ8 489 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-207ENST00000483888 LILRA6Q6PI73 481 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 TCL1BO95988 128 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 C15orf32Q32M92 178 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 NEU4Q8WWR8 484 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-207ENST00000483888 CFHR4Q92496 578 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 TRBV6-6A0A0A6YYG2 114 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 MALRD1Q5VYJ5 2156 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 KIF26AQ9ULI4 1882 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-207ENST00000483888 DTX1Q86Y01 620 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-207ENST00000483888 LRRC75A-AS1Q8N1F1 130 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 TNCP24821 2201 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 SMIM9A6NGZ8 99 aa8.24□□□□□ -1.09
COL12A1-207ENST00000483888 CHCHD2Q9Y6H1 151 aaPredicted RBP8.23□□□□□ -1.09
COL12A1-207ENST00000483888 CACNA1BQ00975 2339 aa8.23□□□□□ -1.09
COL12A1-207ENST00000483888 ZFP2Q6ZN57 461 aa8.23□□□□□ -1.09
COL12A1-207ENST00000483888 TEX49A0A1B0GTD5 131 aa8.23□□□□□ -1.09
COL12A1-207ENST00000483888 SDHAF1A6NFY7 115 aa8.23□□□□□ -1.09
COL12A1-207ENST00000483888 LYPD6Q86Y78 171 aa8.23□□□□□ -1.09
COL12A1-207ENST00000483888 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
COL12A1-207ENST00000483888 TGFBR3LH3BV60 316 aa8.23□□□□□ -1.09
COL12A1-207ENST00000483888 ZCCHC24Q8N2G6 241 aaKnown RBP8.23□□□□□ -1.09
COL12A1-207ENST00000483888 SHANK2-AS3Q9BTD1 123 aa8.23□□□□□ -1.09
COL12A1-207ENST00000483888 H3BT86 120 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 TMEM14BQ9NUH8 114 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 MRPL14Q6P1L8 145 aaKnown RBP8.22□□□□□ -1.09
COL12A1-207ENST00000483888 TRGV1A0A0A0MS02 117 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 FAM120AOSQ5T036 256 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 CHKB-CPT1BH3BT56 60 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 CRYGCP07315 174 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 C20orf197Q8N268 126 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 IGFBPL1Q8WX77 278 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 C14orf132Q9NPU4 83 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 NDUFS5O43920 106 aa8.22□□□□□ -1.09
COL12A1-207ENST00000483888 C1orf162Q8NEQ5 155 aaPredicted RBP8.22□□□□□ -1.09
COL12A1-207ENST00000483888 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 NHSL1Q5SYE7 1610 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 PSPNO60542 156 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 RFPL3SP0C7P2 107 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 MP68P56378 58 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 Q8N1Y9 231 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 SP7Q8TDD2 431 aaPredicted RBP8.21□□□□□ -1.09
COL12A1-207ENST00000483888 BUB3O43684 328 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 FAM110AQ9BQ89 295 aa8.21□□□□□ -1.09
COL12A1-207ENST00000483888 C9orf139Q6ZV77 190 aa8.21□□□□□ -1.1
COL12A1-207ENST00000483888 KLHL30-AS1Q8NEE0 82 aa8.21□□□□□ -1.1
COL12A1-207ENST00000483888 GLI3P10071 1580 aa8.21□□□□□ -1.1
COL12A1-207ENST00000483888 IGHV3-53P01767 116 aa8.21□□□□□ -1.1
COL12A1-207ENST00000483888 RNASE13Q5GAN3 156 aaKnown RBP8.21□□□□□ -1.1
COL12A1-207ENST00000483888 PRDM6Q9NQX0 595 aa8.21□□□□□ -1.1
COL12A1-207ENST00000483888 TFF2Q03403 129 aa8.21□□□□□ -1.1
COL12A1-207ENST00000483888 TMEM61Q8N0U2 210 aa8.21□□□□□ -1.1
COL12A1-207ENST00000483888 WISP1O95388 367 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 Q6P435 159 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 KIAA1549LQ6ZVL6 1849 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 EFNA2O43921 213 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 DKK1O94907 266 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 UPK3BQ9BT76 320 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 CACNA1GO43497 2377 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 C5orf63A6NC05 138 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
COL12A1-207ENST00000483888 CSRP2Q16527 193 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 FXYD5Q96DB9 178 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 THSD7AQ9UPZ6 1657 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 RNF166Q96A37 237 aaPredicted RBP8.2□□□□□ -1.1
COL12A1-207ENST00000483888 IGHV1-2P23083 117 aa8.2□□□□□ -1.1
COL12A1-207ENST00000483888 PCOLCEQ15113 449 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 PLXNA4Q9HCM2 1894 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 TRBV7-1A0A0A6YYK4 115 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 Q71RC1 249 aaPredicted RBP8.19□□□□□ -1.1
COL12A1-207ENST00000483888 PLA2G2EQ9NZK7 142 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 B9A039 149 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 TTTY13Q9BZ97 58 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 NXPH4O95158 308 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 TRBV12-3P01733 135 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 PRR7Q8TB68 274 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 PRR25Q96S07 402 aa8.19□□□□□ -1.1
COL12A1-207ENST00000483888 PRR30Q53SZ7 412 aaPredicted RBP8.19□□□□□ -1.1
COL12A1-207ENST00000483888 IGKV1-16P04430 117 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms