RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 C8orf49Q96NF6 230 aa12.32□□□□□ -0.44
ATG4B-221ENST00000483778 UPK1BO75841 260 aa12.31□□□□□ -0.44
ATG4B-221ENST00000483778 CRYBA4P53673 196 aa12.31□□□□□ -0.44
ATG4B-221ENST00000483778 SIVA1O15304 175 aa12.3□□□□□ -0.44
ATG4B-221ENST00000483778 NXPH4O95158 308 aa12.3□□□□□ -0.44
ATG4B-221ENST00000483778 BTF3P20290 206 aaKnown RBP12.3□□□□□ -0.44
ATG4B-221ENST00000483778 ENKURQ8TC29 256 aa12.3□□□□□ -0.44
ATG4B-221ENST00000483778 S100ZQ8WXG8 99 aa12.3□□□□□ -0.44
ATG4B-221ENST00000483778 MRPL32Q9BYC8 188 aaKnown RBP12.3□□□□□ -0.44
ATG4B-221ENST00000483778 INMT-MINDY4F8WBC2 141 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 OR7C2O60412 319 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 SFTA3P0C7M3 94 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 FFAR4Q5NUL3 377 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 LYPD5Q6UWN5 251 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 LINC00299Q6ZSB3 139 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 PPP1R1CQ8WVI7 109 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 WFDC1Q9HC57 220 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 ICOSQ9Y6W8 199 aa12.29□□□□□ -0.44
ATG4B-221ENST00000483778 ZNF266Q14584 549 aa12.28□□□□□ -0.44
ATG4B-221ENST00000483778 Q8N1X5 172 aa12.28□□□□□ -0.44
ATG4B-221ENST00000483778 ZNF479Q96JC4 524 aa12.28□□□□□ -0.44
ATG4B-221ENST00000483778 ARPC5LQ9BPX5 153 aa12.28□□□□□ -0.44
ATG4B-221ENST00000483778 SMIM3Q9BZL3 60 aa12.28□□□□□ -0.44
ATG4B-221ENST00000483778 DNAH5Q8TE73 4624 aa12.28□□□□□ -0.44
ATG4B-221ENST00000483778 DIRC3C9JPN6 131 aa12.27□□□□□ -0.45
ATG4B-221ENST00000483778 ATP5SQ99766 215 aa12.27□□□□□ -0.45
ATG4B-221ENST00000483778 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.45
ATG4B-221ENST00000483778 HSPB11Q9Y547 144 aa12.27□□□□□ -0.45
ATG4B-221ENST00000483778 RBAKDNA6NC62 111 aa12.26□□□□□ -0.45
ATG4B-221ENST00000483778 MPC2O95563 127 aa12.26□□□□□ -0.45
ATG4B-221ENST00000483778 ZNF415Q09FC8 603 aa12.26□□□□□ -0.45
ATG4B-221ENST00000483778 TMEM183BQ1AE95 376 aa12.26□□□□□ -0.45
ATG4B-221ENST00000483778 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
ATG4B-221ENST00000483778 HYLS1Q96M11 299 aa12.26□□□□□ -0.45
ATG4B-221ENST00000483778 MARVELD1Q9BSK0 173 aa12.26□□□□□ -0.45
ATG4B-221ENST00000483778 TRBV7-9A0A0J9YWB2 115 aa12.25□□□□□ -0.45
ATG4B-221ENST00000483778 GNRH2O43555 120 aa12.25□□□□□ -0.45
ATG4B-221ENST00000483778 CSN1S1P47710 185 aa12.25□□□□□ -0.45
ATG4B-221ENST00000483778 UBE2L3P68036 154 aaKnown RBP12.25□□□□□ -0.45
ATG4B-221ENST00000483778 CYCSP99999 105 aaKnown RBP12.25□□□□□ -0.45
ATG4B-221ENST00000483778 LYPD1Q8N2G4 141 aa12.25□□□□□ -0.45
ATG4B-221ENST00000483778 TVP23CQ96ET8 276 aa12.25□□□□□ -0.45
ATG4B-221ENST00000483778 TRGV4A0A0C4DH28 118 aa12.24□□□□□ -0.45
ATG4B-221ENST00000483778 A6NHS1 94 aa12.24□□□□□ -0.45
ATG4B-221ENST00000483778 C17orf112F2Z3M2 114 aa12.24□□□□□ -0.45
ATG4B-221ENST00000483778 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
ATG4B-221ENST00000483778 Q6AWC8 147 aa12.24□□□□□ -0.45
ATG4B-221ENST00000483778 KCNIP2Q9NS61 270 aa12.24□□□□□ -0.45
ATG4B-221ENST00000483778 PGPA6NDG6 321 aa12.23□□□□□ -0.45
ATG4B-221ENST00000483778 K7EQD1 137 aa12.23□□□□□ -0.45
ATG4B-221ENST00000483778 DNAH10OSP0CZ25 163 aa12.23□□□□□ -0.45
ATG4B-221ENST00000483778 RPL12P30050 165 aaKnown RBP12.23□□□□□ -0.45
ATG4B-221ENST00000483778 NEGR1Q7Z3B1 354 aa12.23□□□□□ -0.45
ATG4B-221ENST00000483778 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
ATG4B-221ENST00000483778 RASL10AQ92737 203 aa12.23□□□□□ -0.45
ATG4B-221ENST00000483778 RPH3ALQ9UNE2 315 aa12.23□□□□□ -0.45
ATG4B-221ENST00000483778 LOC100131303A0A0U1RQF7 123 aa12.22□□□□□ -0.45
ATG4B-221ENST00000483778 SLAQ13239 276 aa12.22□□□□□ -0.45
ATG4B-221ENST00000483778 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
ATG4B-221ENST00000483778 OR10G4Q8NGN3 311 aa12.22□□□□□ -0.45
ATG4B-221ENST00000483778 SCGB1C1Q8TD33 95 aa12.22□□□□□ -0.45
ATG4B-221ENST00000483778 MBD2Q9UBB5 411 aa12.22□□□□□ -0.45
ATG4B-221ENST00000483778 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
ATG4B-221ENST00000483778 TRAV8-1A0A0A6YYK1 113 aa12.21□□□□□ -0.45
ATG4B-221ENST00000483778 HMGB3O15347 200 aaKnown RBP12.21□□□□□ -0.45
ATG4B-221ENST00000483778 GYPEP15421 78 aa12.21□□□□□ -0.45
ATG4B-221ENST00000483778 KHDC3LQ587J8 217 aa12.21□□□□□ -0.45
ATG4B-221ENST00000483778 FAM159AQ6UWV7 190 aa12.21□□□□□ -0.45
ATG4B-221ENST00000483778 OTORQ9NRC9 128 aa12.21□□□□□ -0.45
ATG4B-221ENST00000483778 IGHV3-16A0A0C4DH30 117 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 F6UZH7 168 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 SSNA1O43805 119 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 IFNA5P01569 189 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 RAB2AP61019 212 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 GNG5P63218 68 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 GOLT1AQ6ZVE7 132 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 SGK494Q96LW2 274 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 SPXQ9BT56 116 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 LENEPQ9Y5L5 61 aa12.2□□□□□ -0.46
ATG4B-221ENST00000483778 XGP55808 180 aa12.19□□□□□ -0.46
ATG4B-221ENST00000483778 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
ATG4B-221ENST00000483778 SRIP30626 198 aa12.18□□□□□ -0.46
ATG4B-221ENST00000483778 TAS2R45P59539 299 aa12.18□□□□□ -0.46
ATG4B-221ENST00000483778 KRTAP10-1P60331 282 aa12.18□□□□□ -0.46
ATG4B-221ENST00000483778 TMED6Q8WW62 240 aa12.18□□□□□ -0.46
ATG4B-221ENST00000483778 PGPEP1Q9NXJ5 209 aa12.18□□□□□ -0.46
ATG4B-221ENST00000483778 C11orf21Q9P2W6 132 aa12.18□□□□□ -0.46
ATG4B-221ENST00000483778 TRGV11A0A075B6L2 103 aa12.17□□□□□ -0.46
ATG4B-221ENST00000483778 A0A087WTM6 91 aa12.17□□□□□ -0.46
ATG4B-221ENST00000483778 TYMSP04818 313 aa12.17□□□□□ -0.46
ATG4B-221ENST00000483778 LY96Q9Y6Y9 160 aa12.17□□□□□ -0.46
ATG4B-221ENST00000483778 TRAV4A0A0B4J268 109 aa12.16□□□□□ -0.46
ATG4B-221ENST00000483778 M0R2P5 195 aa12.16□□□□□ -0.46
ATG4B-221ENST00000483778 ZNF80P51504 273 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-221ENST00000483778 ACOT6Q3I5F7 207 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-221ENST00000483778 OR4C5Q8NGB2 326 aa12.16□□□□□ -0.46
ATG4B-221ENST00000483778 CMTM2Q8TAZ6 248 aa12.16□□□□□ -0.46
ATG4B-221ENST00000483778 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms