RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 KIR3DP1A8MWS1 328 aa0.26□□□□□ -2.37
PMS1-219ENST00000483293 CD3DP04234 171 aa0.26□□□□□ -2.37
PMS1-219ENST00000483293 GYPBP06028 91 aa0.26□□□□□ -2.37
PMS1-219ENST00000483293 BCL2P10415 239 aa0.26□□□□□ -2.37
PMS1-219ENST00000483293 TCTEX1D1Q8N7M0 179 aa0.26□□□□□ -2.37
PMS1-219ENST00000483293 TMEM229BQ8NBD8 167 aa0.26□□□□□ -2.37
PMS1-219ENST00000483293 TCOF1Q13428 1488 aaKnown RBP0.26□□□□□ -2.37
PMS1-219ENST00000483293 ESPL1Q14674 2120 aa0.26□□□□□ -2.37
PMS1-219ENST00000483293 MYH1P12882 1939 aa0.25□□□□□ -2.37
PMS1-219ENST00000483293 AFDNP55196 1824 aaKnown RBP0.25□□□□□ -2.37
PMS1-219ENST00000483293 LOC101927531A0A1B0GV80 90 aa0.25□□□□□ -2.37
PMS1-219ENST00000483293 FXYD1O00168 92 aa0.25□□□□□ -2.37
PMS1-219ENST00000483293 EVI2AP22794 236 aa0.25□□□□□ -2.37
PMS1-219ENST00000483293 FXYD3Q14802 87 aa0.25□□□□□ -2.37
PMS1-219ENST00000483293 BOLA2Q9H3K6 86 aa0.25□□□□□ -2.37
PMS1-219ENST00000483293 RBBP6Q7Z6E9 1792 aaKnown RBP0.24□□□□□ -2.37
PMS1-219ENST00000483293 A6NN06 94 aa0.24□□□□□ -2.37
PMS1-219ENST00000483293 E5RI56 91 aa0.24□□□□□ -2.37
PMS1-219ENST00000483293 SAA1P0DJI8 122 aaPredicted RBP0.24□□□□□ -2.37
PMS1-219ENST00000483293 IZUMO2Q6UXV1 221 aa0.24□□□□□ -2.37
PMS1-219ENST00000483293 COMMD3Q9UBI1 195 aa0.24□□□□□ -2.37
PMS1-219ENST00000483293 LAMTOR2Q9Y2Q5 125 aa0.24□□□□□ -2.37
PMS1-219ENST00000483293 CACNA1HO95180 2353 aa0.24□□□□□ -2.37
PMS1-219ENST00000483293 FER1L6Q2WGJ9 1857 aa0.23□□□□□ -2.37
PMS1-219ENST00000483293 LOC107986453A0A1B0GWG9 222 aa0.23□□□□□ -2.37
PMS1-219ENST00000483293 CDC42EP2O14613 210 aa0.23□□□□□ -2.37
PMS1-219ENST00000483293 EDF1O60869 148 aaKnown RBP0.23□□□□□ -2.37
PMS1-219ENST00000483293 SPINK13Q1W4C9 94 aa0.23□□□□□ -2.37
PMS1-219ENST00000483293 C10orf99Q6UWK7 81 aa0.23□□□□□ -2.37
PMS1-219ENST00000483293 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.23□□□□□ -2.37
PMS1-219ENST00000483293 CCDC32Q9BV29 185 aa0.23□□□□□ -2.37
PMS1-219ENST00000483293 MRPL36Q9P0J6 103 aaKnown RBP0.23□□□□□ -2.37
PMS1-219ENST00000483293 TRAV13-1A0A0B4J241 112 aa0.22□□□□□ -2.37
PMS1-219ENST00000483293 TRBV27A0A0K0K1C4 114 aa0.22□□□□□ -2.37
PMS1-219ENST00000483293 IL7P13232 177 aa0.22□□□□□ -2.37
PMS1-219ENST00000483293 IQCJQ1A5X6 159 aa0.22□□□□□ -2.37
PMS1-219ENST00000483293 TMEM78Q5T7P6 136 aa0.22□□□□□ -2.37
PMS1-219ENST00000483293 PCBD2Q9H0N5 130 aa0.22□□□□□ -2.37
PMS1-219ENST00000483293 TRAPPC2LQ9UL33 140 aa0.22□□□□□ -2.37
PMS1-219ENST00000483293 NBDYA0A0U1RRE5 68 aa0.21□□□□□ -2.38
PMS1-219ENST00000483293 IGKCP01834 107 aa0.21□□□□□ -2.38
PMS1-219ENST00000483293 RPL37P61927 97 aaKnown RBP0.21□□□□□ -2.38
PMS1-219ENST00000483293 C5orf56Q8N8D9 126 aa0.21□□□□□ -2.38
PMS1-219ENST00000483293 OR51A4Q8NGJ6 313 aa0.21□□□□□ -2.38
PMS1-219ENST00000483293 FAM135BQ49AJ0 1406 aa0.21□□□□□ -2.38
PMS1-219ENST00000483293 PIEZO1Q92508 2521 aa0.2□□□□□ -2.38
PMS1-219ENST00000483293 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.2□□□□□ -2.38
PMS1-219ENST00000483293 M0QZK8 103 aa0.2□□□□□ -2.38
PMS1-219ENST00000483293 CRYGSP22914 178 aa0.2□□□□□ -2.38
PMS1-219ENST00000483293 GTF2A1P52655 376 aaPredicted RBP0.2□□□□□ -2.38
PMS1-219ENST00000483293 ASB16-AS1Q495Z4 193 aa0.2□□□□□ -2.38
PMS1-219ENST00000483293 OR8J3Q8NGG0 315 aa0.2□□□□□ -2.38
PMS1-219ENST00000483293 LXNQ9BS40 222 aa0.2□□□□□ -2.38
PMS1-219ENST00000483293 MRPL35Q9NZE8 188 aaKnown RBP0.2□□□□□ -2.38
PMS1-219ENST00000483293 MPC1Q9Y5U8 109 aa0.2□□□□□ -2.38
PMS1-219ENST00000483293 TTC28Q96AY4 2481 aa0.2□□□□□ -2.38
PMS1-219ENST00000483293 ROCK1Q13464 1354 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 A0A1W2PRE2 83 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 TMEM30CPA0ZSE6 113 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 H3BMG7 143 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 PFDN1O60925 122 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 SLC25A4P12235 298 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 DNAJB13P59910 316 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 MORN4Q8NDC4 146 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 MED31Q9Y3C7 131 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 SPAG17Q6Q759 2223 aa0.19□□□□□ -2.38
PMS1-219ENST00000483293 BLCAPP62952 87 aa0.18□□□□□ -2.38
PMS1-219ENST00000483293 TPST1O60507 370 aa0.17□□□□□ -2.38
PMS1-219ENST00000483293 BRK1Q8WUW1 75 aa0.17□□□□□ -2.38
PMS1-219ENST00000483293 LOC107984640A0A0U1RRK4 108 aa0.16□□□□□ -2.38
PMS1-219ENST00000483293 LYPD5Q6UWN5 251 aa0.16□□□□□ -2.38
PMS1-219ENST00000483293 THEM6Q8WUY1 208 aa0.16□□□□□ -2.38
PMS1-219ENST00000483293 SMIM7Q9BQ49 75 aa0.16□□□□□ -2.38
PMS1-219ENST00000483293 TMEM189A5PLL7 270 aa0.15□□□□□ -2.39
PMS1-219ENST00000483293 E7EQ34 232 aa0.15□□□□□ -2.39
PMS1-219ENST00000483293 IGF2P01344 180 aa0.15□□□□□ -2.39
PMS1-219ENST00000483293 RPL7P18124 248 aaKnown RBP0.15□□□□□ -2.39
PMS1-219ENST00000483293 CBLN4Q9NTU7 201 aa0.15□□□□□ -2.39
PMS1-219ENST00000483293 ATPIF1Q9UII2 106 aa0.15□□□□□ -2.39
PMS1-219ENST00000483293 ZCCHC11Q5TAX3 1644 aaKnown RBP0.15□□□□□ -2.39
PMS1-219ENST00000483293 RREB1Q92766 1687 aa0.14□□□□□ -2.39
PMS1-219ENST00000483293 JMJD1CQ15652 2540 aa0.14□□□□□ -2.39
PMS1-219ENST00000483293 ETV6P41212 452 aa0.14□□□□□ -2.39
PMS1-219ENST00000483293 POLR2HP52434 150 aaKnown RBP0.14□□□□□ -2.39
PMS1-219ENST00000483293 ABCA12Q86UK0 2595 aa0.14□□□□□ -2.39
PMS1-219ENST00000483293 GPR98Q8WXG9 6306 aa0.13□□□□□ -2.39
PMS1-219ENST00000483293 IFITM5A6NNB3 132 aa0.13□□□□□ -2.39
PMS1-219ENST00000483293 HIGD1CA8MV81 97 aa0.13□□□□□ -2.39
PMS1-219ENST00000483293 NCOR2Q9Y618 2525 aa0.13□□□□□ -2.39
PMS1-219ENST00000483293 MYO7AQ13402 2215 aa0.13□□□□□ -2.39
PMS1-219ENST00000483293 MED13LQ71F56 2210 aa0.13□□□□□ -2.39
PMS1-219ENST00000483293 ABCA4P78363 2273 aa0.12□□□□□ -2.39
PMS1-219ENST00000483293 CDK12Q9NYV4 1490 aaPredicted RBP0.12□□□□□ -2.39
PMS1-219ENST00000483293 TRBV7-6A0A0J9YX20 115 aa0.12□□□□□ -2.39
PMS1-219ENST00000483293 FAM107AO95990 144 aa0.12□□□□□ -2.39
PMS1-219ENST00000483293 SRP9P49458 86 aaKnown RBP0.12□□□□□ -2.39
PMS1-219ENST00000483293 CCSMST1Q4G0I0 132 aa0.12□□□□□ -2.39
PMS1-219ENST00000483293 F8P00451 2351 aa0.11□□□□□ -2.39
PMS1-219ENST00000483293 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
PMS1-219ENST00000483293 A0A0G2JMM0 328 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms