RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 IDO2Q6ZQW0 420 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 SLC25A42Q86VD7 318 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 TMEM61Q8N0U2 210 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 VSTM2AQ8TAG5 236 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 CCDC90BQ9GZT6 254 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 WFDC10AQ9H1F0 79 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 JPT2Q9H910 190 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 RBM12B-AS1Q9P1G2 102 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 RSL24D1Q9UHA3 163 aaKnown RBP4.65□□□□□ -1.67
CLK1-212ENST00000482590 ZNF230Q9UIE0 474 aaPredicted RBP4.65□□□□□ -1.67
CLK1-212ENST00000482590 PRNDQ9UKY0 176 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 TPRKBQ9Y3C4 175 aa4.65□□□□□ -1.67
CLK1-212ENST00000482590 TRAV8-3A0A0A6YYJ7 113 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 IGHV6-1A0A0B4J1U7 121 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 FAM236DA0A1B0GTK5 79 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 A0A1W2PRE2 83 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 J3QRK9 145 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 GGCTO75223 188 aaKnown RBP4.64□□□□□ -1.67
CLK1-212ENST00000482590 FAM236CP0DP71 79 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 HIST1H1DP16402 221 aaKnown RBP4.64□□□□□ -1.67
CLK1-212ENST00000482590 RPL27AP46776 148 aaKnown RBP4.64□□□□□ -1.67
CLK1-212ENST00000482590 IFITM3Q01628 133 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 REG3AQ06141 175 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 C15orf32Q32M92 178 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 CENPWQ5EE01 88 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 COA6Q5JTJ3 125 aaKnown RBP4.64□□□□□ -1.67
CLK1-212ENST00000482590 C10orf55Q5SWW7 151 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 AKR1C8PQ5T2L2 129 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 TMEM91Q6ZNR0 172 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 GOLT1AQ6ZVE7 132 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 H1FOOQ8IZA3 346 aaPredicted RBP4.64□□□□□ -1.67
CLK1-212ENST00000482590 ZNF645Q8N7E2 425 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 TMEM190Q8WZ59 177 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 RNASE7Q9H1E1 156 aaKnown RBP4.64□□□□□ -1.67
CLK1-212ENST00000482590 SH3BGRL3Q9H299 93 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 PSG8Q9UQ74 426 aa4.64□□□□□ -1.67
CLK1-212ENST00000482590 LOC389332A0A1B0GUA5 103 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 C2orf70A6NJV1 201 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 K7EPK0 472 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 HMGB3O15347 200 aaKnown RBP4.63□□□□□ -1.67
CLK1-212ENST00000482590 PFDN1O60925 122 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 KBTBD11O94819 623 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 IGHV3-23P01764 117 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 CHTF8P0CG12 524 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 HIST1H1BP16401 226 aaKnown RBP4.63□□□□□ -1.67
CLK1-212ENST00000482590 CRHBPP24387 322 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 MEOX2P50222 304 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 AQP4P55087 323 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 FABP5Q01469 135 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 C1orf194Q5T5A4 169 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 FAM222AQ5U5X8 452 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 LINC00322Q6ZN03 302 aaPredicted RBP4.63□□□□□ -1.67
CLK1-212ENST00000482590 Q6ZS49 121 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 TCF24Q7RTU0 167 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 TTC9CQ8N5M4 171 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 MGLLQ99685 303 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 ATG5Q9H1Y0 275 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 SLC25A22Q9H936 323 aa4.63□□□□□ -1.67
CLK1-212ENST00000482590 LYRM2Q9NU23 88 aaPredicted RBP4.63□□□□□ -1.67
CLK1-212ENST00000482590 FRAS1Q86XX4 4008 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 LOC102724200A0A096LPH7 203 aaPredicted RBP4.62□□□□□ -1.67
CLK1-212ENST00000482590 IFITM5A6NNB3 132 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 A8MWP6 167 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 LGALS9O00182 355 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 PEX7O00628 323 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 HRASP01112 189 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 DEFA4P12838 97 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 NFYAP23511 347 aaPredicted RBP4.62□□□□□ -1.67
CLK1-212ENST00000482590 GNG2P59768 71 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 JOSD1Q15040 202 aaPredicted RBP4.62□□□□□ -1.67
CLK1-212ENST00000482590 SSX1Q16384 188 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 DEFB114Q30KQ6 69 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 PLET1Q6UQ28 207 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 LHFPL5Q8TAF8 219 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 TMEM167AQ8TBQ9 72 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 SLC35E1Q96K37 410 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 HSD17B10Q99714 261 aaKnown RBP4.62□□□□□ -1.67
CLK1-212ENST00000482590 CHCHD5Q9BSY4 110 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 TMEM243Q9BU79 118 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 GGTLC1Q9BX51 225 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 SAMD10Q9BYL1 202 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 Q9H3A6 140 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 RFNGQ9Y644 331 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 S4R3C0 116 aa4.62□□□□□ -1.67
CLK1-212ENST00000482590 TRAV1-2A0A0B4J238 106 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 NUPR2A6NF83 97 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 PMS2P5A8MQ11 134 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 CYB5BO43169 146 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 LY6G6CO95867 125 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 HLA-DQB1P01920 261 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 FGF6P10767 208 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 CBLN1P23435 193 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 LINC01547P58512 204 aaPredicted RBP4.61□□□□□ -1.67
CLK1-212ENST00000482590 CKS1BP61024 79 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 CATR1Q13166 79 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 C2orf66Q6UXQ4 117 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 Q6ZRU5 148 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 GPHB5Q86YW7 130 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 FXYD5Q96DB9 178 aa4.61□□□□□ -1.67
CLK1-212ENST00000482590 KCNS1Q96KK3 526 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms