RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 DIRC3C9JPN6 131 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 F6UZH7 168 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 GNG5P63218 68 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 ZNF415Q09FC8 603 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 ACOT6Q3I5F7 207 aaPredicted RBP7.26□□□□□ -1.25
CPSF4-212ENST00000482251 C6orf223Q8N319 242 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 HSD17B11Q8NBQ5 300 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 VSIG2Q96IQ7 327 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 LINC00467Q9BRT7 94 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 KRTAP1-5Q9BYS1 174 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 BATF3Q9NR55 127 aa7.26□□□□□ -1.25
CPSF4-212ENST00000482251 DNAH11Q96DT5 4516 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 PCLOQ9Y6V0 5065 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 TRAV8-1A0A0A6YYK1 113 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 A0A1W2PPV4 95 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 SPINK4O60575 86 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 NMBP08949 121 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 ESRGQ1W209 222 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 IBA57Q5T440 356 aaKnown RBP7.25□□□□□ -1.25
CPSF4-212ENST00000482251 GOLT1AQ6ZVE7 132 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 LYPD1Q8N2G4 141 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 CMTM2Q8TAZ6 248 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 MED28Q9H204 178 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 Q9H8V8 135 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 OTORQ9NRC9 128 aa7.25□□□□□ -1.25
CPSF4-212ENST00000482251 A0A096LPF7 62 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 RBAKDNA6NC62 111 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 PGPA6NDG6 321 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 PTTG1O95997 202 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 SFTA3P0C7M3 94 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 ARL14EPLP0DKL9 152 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 CDC34P49427 236 aaPredicted RBP7.24□□□□□ -1.25
CPSF4-212ENST00000482251 ZNF266Q14584 549 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 TMEM183BQ1AE95 376 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 Q5BKY6 102 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 TMEM183AQ8IXX5 376 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 OR10G4Q8NGN3 311 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 OR10G9Q8NGN4 311 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 OR10G7Q8NGN6 311 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 ST6GAL2Q96JF0 529 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 SGK494Q96LW2 274 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 SH3BGRL3Q9H299 93 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 MDFICQ9P1T7 246 aa7.24□□□□□ -1.25
CPSF4-212ENST00000482251 PAX4O43316 350 aa7.23□□□□□ -1.25
CPSF4-212ENST00000482251 FAM74A1Q5RGS3 127 aa7.23□□□□□ -1.25
CPSF4-212ENST00000482251 PQLC2Q6ZP29 291 aa7.23□□□□□ -1.25
CPSF4-212ENST00000482251 C18orf15Q96N68 181 aa7.23□□□□□ -1.25
CPSF4-212ENST00000482251 C8orf49Q96NF6 230 aa7.23□□□□□ -1.25
CPSF4-212ENST00000482251 MRPS16Q9Y3D3 137 aaKnown RBP7.23□□□□□ -1.25
CPSF4-212ENST00000482251 MUC4Q99102 2169 aa7.23□□□□□ -1.25
CPSF4-212ENST00000482251 FXYD6-FXYD2A0A087WZ82 144 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 TRBV7-9A0A0J9YWB2 115 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 H3BNG1 76 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 MED14OSP0DP75 135 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 ATP6V0CP27449 155 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 TTC32Q5I0X7 151 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 Q6AWC8 147 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 FAM159AQ6UWV7 190 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 IQCF2Q8IXL9 164 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 AQP10Q96PS8 301 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 UPK3BQ9BT76 320 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 ICOSQ9Y6W8 199 aa7.22□□□□□ -1.25
CPSF4-212ENST00000482251 TRGV11A0A075B6L2 103 aa7.21□□□□□ -1.26
CPSF4-212ENST00000482251 TRGV4A0A0C4DH28 118 aa7.21□□□□□ -1.26
CPSF4-212ENST00000482251 C16orf90A8MZG2 172 aa7.21□□□□□ -1.26
CPSF4-212ENST00000482251 GCHFRP30047 84 aa7.21□□□□□ -1.26
CPSF4-212ENST00000482251 RAB24Q969Q5 203 aa7.21□□□□□ -1.26
CPSF4-212ENST00000482251 ZNF479Q96JC4 524 aa7.21□□□□□ -1.26
CPSF4-212ENST00000482251 TREM1Q9NP99 234 aa7.21□□□□□ -1.26
CPSF4-212ENST00000482251 GNRH2O43555 120 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 NXPH4O95158 308 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 TYMSP04818 313 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 GIPP09681 153 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-212ENST00000482251 STAG3L2P0CL84 134 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 STAG3L3P0CL85 134 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 CRYBA4P53673 196 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 FHL2Q14192 279 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 OR2G3Q8NGZ4 309 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 PSMG3Q9BT73 122 aaPredicted RBP7.2□□□□□ -1.26
CPSF4-212ENST00000482251 PRO0255Q9UI72 69 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 HHLA3Q9XRX5 114 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 LENEPQ9Y5L5 61 aa7.2□□□□□ -1.26
CPSF4-212ENST00000482251 TRAV21A0A0B4J279 112 aa7.19□□□□□ -1.26
CPSF4-212ENST00000482251 IGHV3-16A0A0C4DH30 117 aa7.19□□□□□ -1.26
CPSF4-212ENST00000482251 RNF222A6NCQ9 220 aa7.19□□□□□ -1.26
CPSF4-212ENST00000482251 GGTLC3B5MD39 225 aa7.19□□□□□ -1.26
CPSF4-212ENST00000482251 LINC00315P59091 139 aa7.19□□□□□ -1.26
CPSF4-212ENST00000482251 RPL7L1Q6DKI1 246 aaKnown RBP7.19□□□□□ -1.26
CPSF4-212ENST00000482251 TMEM75Q8N9X5 138 aa7.19□□□□□ -1.26
CPSF4-212ENST00000482251 TMED6Q8WW62 240 aa7.19□□□□□ -1.26
CPSF4-212ENST00000482251 LOC100131303A0A0U1RQF7 123 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 SIVA1O15304 175 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 TCRAP04437 139 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 GYPEP15421 78 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 SRIP30626 198 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 ZNF80P51504 273 aaPredicted RBP7.18□□□□□ -1.26
CPSF4-212ENST00000482251 SPATA12Q7Z6I5 190 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 C5orf17Q8NAS9 161 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 INO80EQ8NBZ0 244 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms