RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
RXRA-202ENST00000481739 NSD1Q96L73 2696 aaPredicted RBP11.98□□□□□ -0.49
RXRA-202ENST00000481739 LOC102724200A0A096LPH7 203 aaPredicted RBP11.98□□□□□ -0.49
RXRA-202ENST00000481739 ZNF324O75467 553 aaPredicted RBP11.98□□□□□ -0.49
RXRA-202ENST00000481739 GPX1P07203 203 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
RXRA-202ENST00000481739 LGALS1P09382 135 aaKnown RBP11.98□□□□□ -0.49
RXRA-202ENST00000481739 ARMS2P0C7Q2 107 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 HILS1P60008 231 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 ERCC8Q13216 396 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 C10orf99Q6UWK7 81 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 ZNF738Q8NE65 137 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 UBE2E2Q96LR5 201 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 LINC00477Q96M19 166 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 JMJD8Q96S16 334 aa11.98□□□□□ -0.49
RXRA-202ENST00000481739 TRBV7-9A0A0J9YWB2 115 aa11.97□□□□□ -0.49
RXRA-202ENST00000481739 Q6ZSV7 163 aa11.97□□□□□ -0.49
RXRA-202ENST00000481739 FER1L6-AS1Q8NA97 138 aa11.97□□□□□ -0.49
RXRA-202ENST00000481739 F2Z2F3 143 aa11.97□□□□□ -0.49
RXRA-202ENST00000481739 ZNF80P51504 273 aaPredicted RBP11.97□□□□□ -0.49
RXRA-202ENST00000481739 REC114Q7Z4M0 266 aa11.97□□□□□ -0.49
RXRA-202ENST00000481739 OR10J6PQ8NGY7 276 aa11.97□□□□□ -0.49
RXRA-202ENST00000481739 CUBNO60494 3623 aa11.96□□□□□ -0.49
RXRA-202ENST00000481739 CYSRT1A8MQ03 144 aa11.96□□□□□ -0.49
RXRA-202ENST00000481739 LGALS9O00182 355 aa11.96□□□□□ -0.49
RXRA-202ENST00000481739 IGLC6P0CF74 106 aa11.96□□□□□ -0.49
RXRA-202ENST00000481739 AMTP48728 403 aa11.96□□□□□ -0.49
RXRA-202ENST00000481739 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.49
RXRA-202ENST00000481739 RCHY1Q96PM5 261 aa11.96□□□□□ -0.49
RXRA-202ENST00000481739 CNFNQ9BYD5 112 aa11.96□□□□□ -0.49
RXRA-202ENST00000481739 RPLP1P05386 114 aaKnown RBP11.95□□□□□ -0.5
RXRA-202ENST00000481739 ID1P41134 155 aa11.95□□□□□ -0.5
RXRA-202ENST00000481739 TM4SF20Q53R12 229 aa11.95□□□□□ -0.5
RXRA-202ENST00000481739 CHCHD1Q96BP2 118 aaKnown RBP11.95□□□□□ -0.5
RXRA-202ENST00000481739 TSTD3H0UI37 97 aa11.95□□□□□ -0.5
RXRA-202ENST00000481739 HSBP1O75506 76 aa11.95□□□□□ -0.5
RXRA-202ENST00000481739 ORM1P02763 201 aa11.95□□□□□ -0.5
RXRA-202ENST00000481739 PKIAP61925 76 aa11.95□□□□□ -0.5
RXRA-202ENST00000481739 TPPP3Q9BW30 176 aa11.95□□□□□ -0.5
RXRA-202ENST00000481739 F8P00451 2351 aa11.94□□□□□ -0.5
RXRA-202ENST00000481739 PRB4P10163 310 aaPredicted RBP11.94□□□□□ -0.5
RXRA-202ENST00000481739 RAB4AP20338 218 aa11.94□□□□□ -0.5
RXRA-202ENST00000481739 RPL11P62913 178 aaKnown RBP11.94□□□□□ -0.5
RXRA-202ENST00000481739 CDPF1Q6NVV7 123 aa11.94□□□□□ -0.5
RXRA-202ENST00000481739 Q6ZWC4 215 aa11.94□□□□□ -0.5
RXRA-202ENST00000481739 NAGKQ9UJ70 344 aa11.94□□□□□ -0.5
RXRA-202ENST00000481739 CRLF1O75462 422 aa11.93□□□□□ -0.5
RXRA-202ENST00000481739 SCGB1D1O95968 90 aa11.93□□□□□ -0.5
RXRA-202ENST00000481739 TMSB15BA0A087X1C1 80 aa11.93□□□□□ -0.5
RXRA-202ENST00000481739 TCF21O43680 179 aa11.93□□□□□ -0.5
RXRA-202ENST00000481739 PMCHP20382 165 aa11.93□□□□□ -0.5
RXRA-202ENST00000481739 KLHDC1Q8N7A1 406 aa11.93□□□□□ -0.5
RXRA-202ENST00000481739 C20orf173Q96LM9 149 aa11.93□□□□□ -0.5
RXRA-202ENST00000481739 TMEM213A2RRL7 107 aa11.92□□□□□ -0.5
RXRA-202ENST00000481739 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
RXRA-202ENST00000481739 FAM104BQ5XKR9 115 aa11.91□□□□□ -0.5
RXRA-202ENST00000481739 OR8A1Q8NGG7 326 aa11.91□□□□□ -0.5
RXRA-202ENST00000481739 RNASEKQ6P5S7 137 aaKnown RBP11.9□□□□□ -0.5
RXRA-202ENST00000481739 NIT1Q86X76 327 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 KHDC1LQ5JSQ8 128 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 APRG1Q8IVJ8 170 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 DCANP1Q8TF63 244 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 WFDC12Q8WWY7 111 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 FAM19A4Q96LR4 140 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 TMEM191AQ9H0A3 160 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 C16orf95Q9H693 158 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 U3KQK5 164 aa11.9□□□□□ -0.5
RXRA-202ENST00000481739 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
RXRA-202ENST00000481739 IGKV3D-20A0A0C4DH25 116 aa11.89□□□□□ -0.51
RXRA-202ENST00000481739 M0QZ24 198 aa11.89□□□□□ -0.51
RXRA-202ENST00000481739 TWIST1Q15672 202 aa11.89□□□□□ -0.51
RXRA-202ENST00000481739 M0R2Z0 102 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 OR5AL1P0C617 328 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 LINC00614P0C842 121 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 NTF3P20783 257 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 HOXD3P31249 432 aaPredicted RBP11.88□□□□□ -0.51
RXRA-202ENST00000481739 ZNF575Q86XF7 245 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 ORMDL3Q8N138 153 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 ZFAND2AQ8N6M9 145 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 LINC01006Q8NI28 216 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 IGHV4OR15-8A0A075B7B6 117 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 A0A087WW49 117 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 LINC00587B1AMM8 73 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 PPBPP02775 128 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
RXRA-202ENST00000481739 CACNG7P62955 275 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 C4orf3Q8WVX3 66 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 ODF3Q96PU9 254 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 LAMTOR2Q9Y2Q5 125 aa11.88□□□□□ -0.51
RXRA-202ENST00000481739 SETD2Q9BYW2 2564 aaPredicted RBP11.88□□□□□ -0.51
RXRA-202ENST00000481739 SYNJ2BPP57105 145 aa11.87□□□□□ -0.51
RXRA-202ENST00000481739 TEX43Q6ZNM6 134 aa11.87□□□□□ -0.51
RXRA-202ENST00000481739 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 SNAI2O43623 268 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 ZNF705DP0CH99 300 aaPredicted RBP11.86□□□□□ -0.51
RXRA-202ENST00000481739 ZNF705BP0CI00 300 aaPredicted RBP11.86□□□□□ -0.51
RXRA-202ENST00000481739 KRTDAPP60985 99 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 FAM19A2Q8N3H0 131 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 URB1-AS1Q96HZ7 61 aa11.86□□□□□ -0.51
RXRA-202ENST00000481739 NDUFA7O95182 113 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms