RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 TMEM242Q9NWH2 141 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 TP73-AS1Q9UF72 201 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 LSM2Q9Y333 95 aaKnown RBP1.9□□□□□ -2.11
PTPN12-211ENST00000481154 KLK5Q9Y337 293 aaPredicted RBP1.9□□□□□ -2.11
PTPN12-211ENST00000481154 MYH9P35579 1960 aaKnown RBP1.9□□□□□ -2.11
PTPN12-211ENST00000481154 ABCA10Q8WWZ4 1543 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 ADAMTSL1Q8N6G6 1762 aa1.9□□□□□ -2.11
PTPN12-211ENST00000481154 CFTRP13569 1480 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 MPDZO75970 2070 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 PHLPP1O60346 1717 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 PLIN4Q96Q06 1357 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 LOC107986453A0A1B0GWG9 222 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 GRIFINA4D1Z8 144 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 SDCBPO00560 298 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-211ENST00000481154 UBL3O95164 117 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 SFT2D2O95562 160 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 CD3DP04234 171 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 NMBP08949 121 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 SAA1P0DJI8 122 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-211ENST00000481154 FAUP35544 74 aaKnown RBP1.89□□□□□ -2.11
PTPN12-211ENST00000481154 ATP5EP56381 51 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-211ENST00000481154 TSPEAR-AS2P59090 65 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 KRTDAPP60985 99 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 ZNF322Q6U7Q0 402 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-211ENST00000481154 SLC25A26Q70HW3 274 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 ARPINQ7Z6K5 226 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 LINC00301Q8NCQ3 95 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 Q8NDZ9 215 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 SPTSSAQ969W0 71 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 DPH3P1Q9H4G8 78 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 C16orf95Q9H693 158 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 NHP2Q9NX24 153 aaKnown RBP1.89□□□□□ -2.11
PTPN12-211ENST00000481154 LINC00588Q9Y4M8 146 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 THSD7AQ9UPZ6 1657 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 DOCK4Q8N1I0 1966 aa1.89□□□□□ -2.11
PTPN12-211ENST00000481154 COL5A3P25940 1745 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-211ENST00000481154 PLXNA3P51805 1871 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 UBE2L5PA0A1B0GUS4 154 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 KANTRA0A1W2PQU2 76 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 J3QKU1 62 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 K7ERJ3 54 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 CREBL2O60519 120 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-211ENST00000481154 CFDP00746 253 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-211ENST00000481154 IGHV1-69P01742 117 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 IL5P05113 134 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 IGLC2P0DOY2 106 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 IGLC3P0DOY3 106 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 IGHV3-30-3P0DP02 117 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 SLC25A6P12236 298 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 PIPP12273 146 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-211ENST00000481154 SLC25A16P16260 332 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 RNASE4P34096 147 aaKnown RBP1.88□□□□□ -2.11
PTPN12-211ENST00000481154 HINT1P49773 126 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-211ENST00000481154 UBE2L3P68036 154 aaKnown RBP1.88□□□□□ -2.11
PTPN12-211ENST00000481154 ASB16-AS1Q495Z4 193 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 MIC13Q5XKP0 118 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 HEPN1Q6WQI6 88 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 SPATA12Q7Z6I5 190 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 SIGLECL1Q8N7X8 197 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 OR10AG1Q8NH19 301 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 PMCHL2Q9BQD1 86 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 PHLDA3Q9Y5J5 127 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 TNRC6AQ8NDV7 1962 aaKnown RBP1.88□□□□□ -2.11
PTPN12-211ENST00000481154 NRKQ7Z2Y5 1582 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 SBF1O95248 1867 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 ERVK-7P63135 1459 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 FYCO1Q9BQS8 1478 aa1.88□□□□□ -2.11
PTPN12-211ENST00000481154 RBBP6Q7Z6E9 1792 aaKnown RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 ARAP3Q8WWN8 1544 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 ADGBQ8N7X0 1667 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 IGKV1-9A0A0C4DH69 117 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 IGKV1-12A0A0C4DH73 117 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 HFM1A2PYH4 1435 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 A6NIN4 97 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 ATOX1O00244 68 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 LECT2O14960 151 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 IGKV1D-12P01611 117 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 IGHV3-7P01780 117 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 NFYAP23511 347 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 PEBP1P30086 187 aaKnown RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 CCL8P80075 99 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 CHD3Q12873 2000 aaKnown RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 PMCHL1Q16048 86 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 RALGAPA2Q2PPJ7 1873 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 FER1L6Q2WGJ9 1857 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 MRPL51Q4U2R6 128 aaKnown RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 CEP170Q5SW79 1584 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 ZFAND2AQ8N6M9 145 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 THOC2Q8NI27 1593 aaKnown RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 C10orf105Q8TEF2 133 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 PPDPFLQ8WWR9 84 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 CASKIN1Q8WXD9 1431 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 TRPM3Q9HCF6 1732 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-211ENST00000481154 SPCS1Q9Y6A9 102 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 CASZ1Q86V15 1759 aa1.87□□□□□ -2.11
PTPN12-211ENST00000481154 ABCC3O15438 1527 aa1.86□□□□□ -2.11
PTPN12-211ENST00000481154 CCDC88AQ3V6T2 1871 aa1.86□□□□□ -2.11
PTPN12-211ENST00000481154 MUC6Q6W4X9 2439 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms