RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 KRASP01116 189 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 IGKV1-5P01602 117 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 PRH1P02810 166 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 REG1AP05451 166 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 S100A9P06702 114 aaKnown RBP2.76□□□□□ -1.97
UPF3A-207ENST00000481131 CTSDP07339 412 aaPredicted RBP2.76□□□□□ -1.97
UPF3A-207ENST00000481131 OR5AC1P0C628 307 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 AKR1C4P17516 323 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 UBE2KP61086 200 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 SUPT4H1P63272 117 aaKnown RBP2.76□□□□□ -1.97
UPF3A-207ENST00000481131 CATR1Q13166 79 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 FXYD3Q14802 87 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 MSMO1Q15800 293 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 VMA21Q3ZAQ7 101 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 SPINK9Q5DT21 86 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 TRIQKQ629K1 86 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 THOC7Q6I9Y2 204 aaKnown RBP2.76□□□□□ -1.97
UPF3A-207ENST00000481131 UNQ5815/PRO19632Q6UWF5 114 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 PRNTQ86SH4 94 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 GDPD1Q8N9F7 314 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 TMEM167AQ8TBQ9 72 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 PRRT1Q99946 306 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 ALX4Q9H161 411 aaPredicted RBP2.76□□□□□ -1.97
UPF3A-207ENST00000481131 BATF3Q9NR55 127 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 COPZ2Q9P299 210 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 C14orf166Q9Y224 244 aaKnown RBP2.76□□□□□ -1.97
UPF3A-207ENST00000481131 NUBP2Q9Y5Y2 271 aa2.76□□□□□ -1.97
UPF3A-207ENST00000481131 DNAH3Q8TD57 4116 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 C3orf85A0A1B0GTC6 90 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 CRYM-AS1A6NIL9 109 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 H0Y980 276 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.75□□□□□ -1.97
UPF3A-207ENST00000481131 UPK2O00526 184 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 LYRM1O43325 122 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 OR2A4O95047 310 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 HRASP01112 189 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 NQO2P16083 231 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 PSMB8P28062 276 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 RPL27AP46776 148 aaKnown RBP2.75□□□□□ -1.97
UPF3A-207ENST00000481131 LGALS7P47929 136 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 INPP1P49441 399 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 AP3S2P59780 193 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 PPP1R1AQ13522 171 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 PMVKQ15126 192 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 PRR9Q5T870 116 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 FAM19A1Q7Z5A9 133 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 TMED4Q7Z7H5 227 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 SELENOHQ8IZQ5 122 aaKnown RBP2.75□□□□□ -1.97
UPF3A-207ENST00000481131 OR4X2Q8NGF9 303 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 SGMS2Q8NHU3 365 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 MYOZ3Q8TDC0 251 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 OR2A7Q96R45 310 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 PHB2Q99623 299 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 TMEM222Q9H0R3 208 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 NAA60Q9H7X0 242 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 COA4Q9NYJ1 87 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 BET1LQ9NYM9 111 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 COMMD9Q9P000 198 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 SCP2D1Q9UJQ7 156 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 FBN3Q75N90 2809 aa2.75□□□□□ -1.97
UPF3A-207ENST00000481131 NOTCH1P46531 2555 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 MGAM2Q2M2H8 2515 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 TEX50A0A1B0GTY4 177 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 IGLC7A0M8Q6 106 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 I3L521 148 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 NDUFB6O95139 128 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 TRGV3P03979 118 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 SPNP16150 400 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 HLA-GP17693 338 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 S100GP29377 79 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 FAUP35544 74 aaKnown RBP2.74□□□□□ -1.97
UPF3A-207ENST00000481131 PSMB2P49721 201 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 AKR1C2P52895 323 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 RAB25P57735 213 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 TPPP2P59282 170 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 WT1-ASQ06250 92 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 BTN1A1Q13410 526 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 ZNF846Q147U1 533 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 SURF2Q15527 256 aaPredicted RBP2.74□□□□□ -1.97
UPF3A-207ENST00000481131 VAMP3Q15836 100 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 AKIRIN2Q53H80 203 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 ACTL10Q5JWF8 245 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 LPCAT3Q6P1A2 487 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 CLEC19AQ6UXS0 136 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 LYZL2Q7Z4W2 148 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 NDUFA11Q86Y39 141 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 RNASE11Q8TAA1 199 aaKnown RBP2.74□□□□□ -1.97
UPF3A-207ENST00000481131 S100ZQ8WXG8 99 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 BORCS5Q969J3 196 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 GPR146Q96CH1 333 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 SEC22CQ9BRL7 303 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 CCDC32Q9BV29 185 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 TMEM14BQ9NUH8 114 aa2.74□□□□□ -1.97
UPF3A-207ENST00000481131 C9orf170A2RU37 121 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 NAP1L6A6NFF2 107 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 PPP5D1E7EU14 171 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 ADAP1O75689 374 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 SNAPC5O75971 98 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms