RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 RNASE4P34096 147 aaKnown RBP8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 AKR1C3P42330 323 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 TMEM183BQ1AE95 376 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 ZNF506Q5JVG8 444 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 SAPCD1Q5SSQ6 148 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 PRNTQ86SH4 94 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 TMEM256Q8N2U0 113 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 FAM210AQ96ND0 272 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 TREM1Q9NP99 234 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 TRAV12-3A0A0B4J271 114 aa8.95□□□□□ -0.98
SHROOM3-205ENST00000481002 BTN1A1Q13410 526 aa8.95□□□□□ -0.98
SHROOM3-205ENST00000481002 PRR9Q5T870 116 aa8.95□□□□□ -0.98
SHROOM3-205ENST00000481002 Q6AWC8 147 aa8.95□□□□□ -0.98
SHROOM3-205ENST00000481002 NDFIP1Q9BT67 221 aa8.95□□□□□ -0.98
SHROOM3-205ENST00000481002 ZFP30Q9Y2G7 519 aa8.95□□□□□ -0.98
SHROOM3-205ENST00000481002 IGHV3OR16-12A0A075B7B8 117 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 H7BYZ3 331 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 MIFP14174 115 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 RAB14P61106 215 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 UBE2G1P62253 170 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 COX8CQ7Z4L0 72 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 Q86TA4 180 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 C8orf49Q96NF6 230 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 LINC01587Q99440 93 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 NIPSNAP3BQ9BS92 247 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 TMEM208Q9BTX3 173 aa8.94□□□□□ -0.98
SHROOM3-205ENST00000481002 LTAP01374 205 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 TAS2R60P59551 318 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 SMUG1Q53HV7 270 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 TOR2AQ5JU69 321 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 CLLU1Q5K131 121 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 Q6ZQT7 251 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 Q8NAQ8 132 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 LINC00467Q9BRT7 94 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 EIF5A2Q9GZV4 153 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 MED9Q9NWA0 146 aa8.93□□□□□ -0.98
SHROOM3-205ENST00000481002 IGHV4-28A0A0C4DH34 117 aa8.92□□□□□ -0.98
SHROOM3-205ENST00000481002 ZNF705GA8MUZ8 300 aaPredicted RBP8.92□□□□□ -0.98
SHROOM3-205ENST00000481002 TMEM250H0YL14 139 aa8.92□□□□□ -0.98
SHROOM3-205ENST00000481002 RPL35P42766 123 aaKnown RBP8.92□□□□□ -0.98
SHROOM3-205ENST00000481002 RRN3P1Q2M238 152 aa8.92□□□□□ -0.98
SHROOM3-205ENST00000481002 DERL1Q9BUN8 251 aa8.92□□□□□ -0.98
SHROOM3-205ENST00000481002 MLST8Q9BVC4 326 aa8.92□□□□□ -0.98
SHROOM3-205ENST00000481002 TRAV21A0A0B4J279 112 aa8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 GCGP01275 180 aa8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 PRM2P04554 102 aa8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 ZNF80P51504 273 aaPredicted RBP8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 BAGE2Q86Y30 109 aa8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 TMEM183AQ8IXX5 376 aa8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 C11orf68Q9H3H3 251 aaKnown RBP8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 SMDT1Q9H4I9 107 aa8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 EDA2RQ9HAV5 297 aa8.91□□□□□ -0.98
SHROOM3-205ENST00000481002 IGHV1OR15-1A0A075B7D0 117 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 A0A0J9YWU9 116 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 RAB19A4D1S5 217 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 TMEM189A5PLL7 270 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 RGS13O14921 159 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 PFN1P07737 140 aaKnown RBP8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 SRP19P09132 144 aaKnown RBP8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 AZU1P20160 251 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 CRIP1P50238 77 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 ANXA2RQ3ZCQ2 193 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 ZNF493Q6ZR52 646 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 EIF4E3Q8N5X7 224 aaKnown RBP8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 ZC2HC1AQ96GY0 325 aa8.9□□□□□ -0.98
SHROOM3-205ENST00000481002 FABP5P3A8MUU1 101 aa8.89□□□□□ -0.99
SHROOM3-205ENST00000481002 DEFB4AO15263 64 aa8.89□□□□□ -0.99
SHROOM3-205ENST00000481002 HTN1P15515 57 aa8.89□□□□□ -0.99
SHROOM3-205ENST00000481002 PEA15Q15121 130 aa8.89□□□□□ -0.99
SHROOM3-205ENST00000481002 ZNF674Q2M3X9 581 aa8.89□□□□□ -0.99
SHROOM3-205ENST00000481002 TDRG1Q3Y452 100 aa8.89□□□□□ -0.99
SHROOM3-205ENST00000481002 RNASE8Q8TDE3 154 aaKnown RBP8.89□□□□□ -0.99
SHROOM3-205ENST00000481002 SMIM12Q96EX1 92 aa8.89□□□□□ -0.99
SHROOM3-205ENST00000481002 TRBV20OR9-2A0A075B6H5 130 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 PLAC8L1A1L4L8 177 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 IGLV2-8P01709 118 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 SRSF3P84103 164 aaKnown RBP8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 CENPWQ5EE01 88 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 FAM159AQ6UWV7 190 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 NHLRC2Q8NBF2 726 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 TMEM263Q8WUH6 116 aaKnown RBP8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 C16orf74Q96GX8 76 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 PARLQ9H300 379 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 C11orf21Q9P2W6 132 aa8.88□□□□□ -0.99
SHROOM3-205ENST00000481002 CBY3A6NI87 242 aa8.87□□□□□ -0.99
SHROOM3-205ENST00000481002 C9JCJ5 164 aa8.87□□□□□ -0.99
SHROOM3-205ENST00000481002 C9JQL5 133 aa8.87□□□□□ -0.99
SHROOM3-205ENST00000481002 GNG4P50150 75 aa8.87□□□□□ -0.99
SHROOM3-205ENST00000481002 MUC21Q5SSG8 566 aa8.87□□□□□ -0.99
SHROOM3-205ENST00000481002 FAM162BQ5T6X4 162 aa8.87□□□□□ -0.99
SHROOM3-205ENST00000481002 KCNS1Q96KK3 526 aa8.87□□□□□ -0.99
SHROOM3-205ENST00000481002 TP53TG3Q9ULZ0 132 aa8.87□□□□□ -0.99
SHROOM3-205ENST00000481002 SH2D1AO60880 128 aa8.86□□□□□ -0.99
SHROOM3-205ENST00000481002 IBA57Q5T440 356 aaKnown RBP8.86□□□□□ -0.99
SHROOM3-205ENST00000481002 C11orf72Q8NBR9 251 aa8.86□□□□□ -0.99
SHROOM3-205ENST00000481002 WWC2-AS2Q96NR7 200 aa8.86□□□□□ -0.99
SHROOM3-205ENST00000481002 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 GNRH2O43555 120 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 CEBPGP53567 150 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms